C19orf47 protein (human) - STRING database

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C19orf47

Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47 (422 aa)

Predicted Functional Partners:

ZNF780A

0.583

ZBTB45

0.571

C17orf85

0.571

GPATCH1

0.566

C19orf54

0.559

TIGD2

0.559

FAM124A

0.558

THOC5

0.546

ZNF546

0.540

TTC9B

0.535

Your Current Organism:

Homo sapiens

NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C17orf85	C19orf47	ENSP00000373657	ENSP00000463159	Nuclear cap-binding protein subunit 3; Associates with NCBP1/CBP80 to form an alternative cap- binding complex (CBC) which plays a key role in mRNA export. NCBP3 serves as adapter protein linking the capped RNAs (m7GpppG-capped RNA) to NCBP1/CBP80. Unlike the conventional CBC with NCBP2 which binds both small nuclear RNA (snRNA) and messenger (mRNA) and is involved in their export from the nucleus, the alternative CBC with NCBP3 does not bind snRNA and associates only with mRNA thereby playing a role in only mRNA export. The alternative CBC is particularly important in cellular stress [...]	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47	0.571
C17orf85	THOC5	ENSP00000373657	ENSP00000420306	Nuclear cap-binding protein subunit 3; Associates with NCBP1/CBP80 to form an alternative cap- binding complex (CBC) which plays a key role in mRNA export. NCBP3 serves as adapter protein linking the capped RNAs (m7GpppG-capped RNA) to NCBP1/CBP80. Unlike the conventional CBC with NCBP2 which binds both small nuclear RNA (snRNA) and messenger (mRNA) and is involved in their export from the nucleus, the alternative CBC with NCBP3 does not bind snRNA and associates only with mRNA thereby playing a role in only mRNA export. The alternative CBC is particularly important in cellular stress [...]	THO complex subunit 5 homolog; Acts as component of the THO subcomplex of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export, and which specifically associates with spliced mRNA and not with unspliced pre-mRNA. TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap-dependent manner to a region near the 5’ end of the mRNA where it functions in mRNA export to the cytoplasm via the TAP/NFX1 pathway. The TREX complex is essential [...]	0.692
C19orf47	C17orf85	ENSP00000463159	ENSP00000373657	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47	Nuclear cap-binding protein subunit 3; Associates with NCBP1/CBP80 to form an alternative cap- binding complex (CBC) which plays a key role in mRNA export. NCBP3 serves as adapter protein linking the capped RNAs (m7GpppG-capped RNA) to NCBP1/CBP80. Unlike the conventional CBC with NCBP2 which binds both small nuclear RNA (snRNA) and messenger (mRNA) and is involved in their export from the nucleus, the alternative CBC with NCBP3 does not bind snRNA and associates only with mRNA thereby playing a role in only mRNA export. The alternative CBC is particularly important in cellular stress [...]	0.571
C19orf47	C19orf54	ENSP00000463159	ENSP00000367564	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47	UPF0692 protein C19orf54; Chromosome 19 open reading frame 54; Belongs to the UPF0692 family	0.559
C19orf47	FAM124A	ENSP00000463159	ENSP00000280057	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47	Protein FAM124A; Family with sequence similarity 124 member A; Belongs to the FAM124 family	0.558
C19orf47	GPATCH1	ENSP00000463159	ENSP00000170564	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47	G-patch domain containing 1; Belongs to the GPATCH1 family	0.566
C19orf47	THOC5	ENSP00000463159	ENSP00000420306	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47	THO complex subunit 5 homolog; Acts as component of the THO subcomplex of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export, and which specifically associates with spliced mRNA and not with unspliced pre-mRNA. TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap-dependent manner to a region near the 5’ end of the mRNA where it functions in mRNA export to the cytoplasm via the TAP/NFX1 pathway. The TREX complex is essential [...]	0.546
C19orf47	TIGD2	ENSP00000463159	ENSP00000317170	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47	Tigger transposable element-derived protein 2; Helix-turn-helix CENPB type domain containing; DNA transposon derived genes	0.559
C19orf47	TTC9B	ENSP00000463159	ENSP00000311760	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47	Tetratricopeptide repeat domain containing	0.535
C19orf47	ZBTB45	ENSP00000463159	ENSP00000469089	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47	Zinc finger and BTB domain-containing protein 45; May be involved in transcriptional regulation (Probable). In the central nervous system, may play a role in glial cell differentiation (By similarity); BTB domain containing	0.571
C19orf47	ZNF546	ENSP00000463159	ENSP00000339823	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47	Zinc finger protein 546; May be involved in transcriptional regulation; Zinc fingers C2H2-type	0.540
C19orf47	ZNF780A	ENSP00000463159	ENSP00000400997	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47	Zinc finger protein 780A; May be involved in transcriptional regulation; Zinc fingers C2H2-type	0.583
C19orf54	C19orf47	ENSP00000367564	ENSP00000463159	UPF0692 protein C19orf54; Chromosome 19 open reading frame 54; Belongs to the UPF0692 family	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47	0.559
C19orf54	TIGD2	ENSP00000367564	ENSP00000317170	UPF0692 protein C19orf54; Chromosome 19 open reading frame 54; Belongs to the UPF0692 family	Tigger transposable element-derived protein 2; Helix-turn-helix CENPB type domain containing; DNA transposon derived genes	0.550
C19orf54	TTC9B	ENSP00000367564	ENSP00000311760	UPF0692 protein C19orf54; Chromosome 19 open reading frame 54; Belongs to the UPF0692 family	Tetratricopeptide repeat domain containing	0.526
C19orf54	ZNF546	ENSP00000367564	ENSP00000339823	UPF0692 protein C19orf54; Chromosome 19 open reading frame 54; Belongs to the UPF0692 family	Zinc finger protein 546; May be involved in transcriptional regulation; Zinc fingers C2H2-type	0.530
C19orf54	ZNF780A	ENSP00000367564	ENSP00000400997	UPF0692 protein C19orf54; Chromosome 19 open reading frame 54; Belongs to the UPF0692 family	Zinc finger protein 780A; May be involved in transcriptional regulation; Zinc fingers C2H2-type	0.570
FAM124A	C19orf47	ENSP00000280057	ENSP00000463159	Protein FAM124A; Family with sequence similarity 124 member A; Belongs to the FAM124 family	Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47	0.558
FAM124A	GPATCH1	ENSP00000280057	ENSP00000170564	Protein FAM124A; Family with sequence similarity 124 member A; Belongs to the FAM124 family	G-patch domain containing 1; Belongs to the GPATCH1 family	0.539
FAM124A	ZBTB45	ENSP00000280057	ENSP00000469089	Protein FAM124A; Family with sequence similarity 124 member A; Belongs to the FAM124 family	Zinc finger and BTB domain-containing protein 45; May be involved in transcriptional regulation (Probable). In the central nervous system, may play a role in glial cell differentiation (By similarity); BTB domain containing	0.558

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