POTEB2 protein (human) - STRING database

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

POTEB2

POTE ankyrin domain family member B2; Belongs to the POTE family (544 aa)

Predicted Functional Partners:

TRIM23

0.866

GOLGA6L6

0.718

ENSG00000274102

0.644

ENSG00000182974

0.642

OR4F17

0.587

GOLGA6L1

0.585

OR4F3

0.559

339010

0.558

EDDM3A

0.526

FAM72B

0.510

Your Current Organism:

Homo sapiens

NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but resolution at 400 dpi

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as simple tabular text output:

download

TSV: tab separated values - can be opened in Excel

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
339010	ENSG00000182974	ENSP00000483103	ENSP00000329467	Homo sapiens POTE ankyrin domain family, member B-like (LOC102724631), transcript variant 1, mRNA; Belongs to the POTE family	Uncharacterized protein; Odorant receptor; Olfactory receptors, family 4	0.472
339010	GOLGA6L1	ENSP00000483103	ENSP00000478478	Homo sapiens POTE ankyrin domain family, member B-like (LOC102724631), transcript variant 1, mRNA; Belongs to the POTE family	Golgin subfamily A member 6-like protein 1; Golgin A6 family-like 1; Belongs to the GOLGA6 family	0.559
339010	POTEB2	ENSP00000483103	ENSP00000456953	Homo sapiens POTE ankyrin domain family, member B-like (LOC102724631), transcript variant 1, mRNA; Belongs to the POTE family	POTE ankyrin domain family member B2; Belongs to the POTE family	0.558
339010	TRIM23	ENSP00000483103	ENSP00000231524	Homo sapiens POTE ankyrin domain family, member B-like (LOC102724631), transcript variant 1, mRNA; Belongs to the POTE family	E3 ubiquitin-protein ligase TRIM23; Acts as an E3 ubiquitin-protein ligase. In the presence of the human cytomegalovirus (HCMV) protein UL144, participates in ’Lys-63’-linked auto-ubiquitination of TRAF6 resulting in the virally controlled activation of NF-kappa-B at early time of infection. The C-terminus can act as an allosteric activator of the cholera toxin catalytic subunit; In the C-terminal section; belongs to the small GTPase superfamily. Arf family	0.692
EDDM3A	POTEB2	ENSP00000315098	ENSP00000456953	Epididymal secretory protein E3-alpha; Possible function in sperm maturation	POTE ankyrin domain family member B2; Belongs to the POTE family	0.526
ENSG00000182974	339010	ENSP00000329467	ENSP00000483103	Uncharacterized protein; Odorant receptor; Olfactory receptors, family 4	Homo sapiens POTE ankyrin domain family, member B-like (LOC102724631), transcript variant 1, mRNA; Belongs to the POTE family	0.472
ENSG00000182974	FAM72B	ENSP00000329467	ENSP00000358397	Uncharacterized protein; Odorant receptor; Olfactory receptors, family 4	Protein FAM72B; Family with sequence similarity 72 member B; Belongs to the FAM72 family	0.503
ENSG00000182974	GOLGA6L1	ENSP00000329467	ENSP00000478478	Uncharacterized protein; Odorant receptor; Olfactory receptors, family 4	Golgin subfamily A member 6-like protein 1; Golgin A6 family-like 1; Belongs to the GOLGA6 family	0.641
ENSG00000182974	GOLGA6L6	ENSP00000329467	ENSP00000480376	Uncharacterized protein; Odorant receptor; Olfactory receptors, family 4	Golgin subfamily A member 6-like protein 6; Golgin A6 family-like 6; Belongs to the GOLGA6 family	0.588
ENSG00000182974	POTEB2	ENSP00000329467	ENSP00000456953	Uncharacterized protein; Odorant receptor; Olfactory receptors, family 4	POTE ankyrin domain family member B2; Belongs to the POTE family	0.642
ENSG00000274102	FAM72B	ENSP00000483239	ENSP00000358397	Olfactory receptor 4M2; Odorant receptor; Olfactory receptors, family 4	Protein FAM72B; Family with sequence similarity 72 member B; Belongs to the FAM72 family	0.510
ENSG00000274102	GOLGA6L1	ENSP00000483239	ENSP00000478478	Olfactory receptor 4M2; Odorant receptor; Olfactory receptors, family 4	Golgin subfamily A member 6-like protein 1; Golgin A6 family-like 1; Belongs to the GOLGA6 family	0.571
ENSG00000274102	GOLGA6L6	ENSP00000483239	ENSP00000480376	Olfactory receptor 4M2; Odorant receptor; Olfactory receptors, family 4	Golgin subfamily A member 6-like protein 6; Golgin A6 family-like 6; Belongs to the GOLGA6 family	0.589
ENSG00000274102	POTEB2	ENSP00000483239	ENSP00000456953	Olfactory receptor 4M2; Odorant receptor; Olfactory receptors, family 4	POTE ankyrin domain family member B2; Belongs to the POTE family	0.644
FAM72B	ENSG00000182974	ENSP00000358397	ENSP00000329467	Protein FAM72B; Family with sequence similarity 72 member B; Belongs to the FAM72 family	Uncharacterized protein; Odorant receptor; Olfactory receptors, family 4	0.503
FAM72B	ENSG00000274102	ENSP00000358397	ENSP00000483239	Protein FAM72B; Family with sequence similarity 72 member B; Belongs to the FAM72 family	Olfactory receptor 4M2; Odorant receptor; Olfactory receptors, family 4	0.510
FAM72B	OR4F17	ENSP00000358397	ENSP00000467301	Protein FAM72B; Family with sequence similarity 72 member B; Belongs to the FAM72 family	Olfactory receptor 4F17; Odorant receptor; Olfactory receptors, family 4	0.587
FAM72B	OR4F3	ENSP00000358397	ENSP00000394282	Protein FAM72B; Family with sequence similarity 72 member B; Belongs to the FAM72 family	Olfactory receptor, family 4, subfamily F, member 3; Odorant receptor; Olfactory receptors, family 4	0.559
FAM72B	POTEB2	ENSP00000358397	ENSP00000456953	Protein FAM72B; Family with sequence similarity 72 member B; Belongs to the FAM72 family	POTE ankyrin domain family member B2; Belongs to the POTE family	0.510
GOLGA6L1	339010	ENSP00000478478	ENSP00000483103	Golgin subfamily A member 6-like protein 1; Golgin A6 family-like 1; Belongs to the GOLGA6 family	Homo sapiens POTE ankyrin domain family, member B-like (LOC102724631), transcript variant 1, mRNA; Belongs to the POTE family	0.559

page 1 of 3

Network

Cooccurrence

Experiments

Neighborhood

Textmining

Fusion

Databases

Coexpression

© STRING Consortium 2020

Credits

Access

Info

About