• Version:
  • 11.0 [archived version]
STRINGSTRING
CCDC148 CCDC148 THAP10 THAP10 LRRC49 LRRC49 TBC1D19 TBC1D19 TPGS1 TPGS1 TTLL1 TTLL1 EIF3F EIF3F TPGS2 TPGS2 NICN1 NICN1 KIAA1841 KIAA1841 C11orf49 C11orf49
"LRRC49" - Leucine-rich repeat-containing protein 49 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC49Leucine-rich repeat-containing protein 49; Leucine rich repeat containing 49 (691 aa)    
Predicted Functional Partners:
TPGS1
Tubulin polyglutamylase complex subunit 1; May act in the targeting of the tubulin polyglutamylase complex. Required for the development of the spermatid flagellum (By similarity) (290 aa)
       
  0.991
TTLL1
Probable tubulin polyglutamylase TTLL1; Catalytic subunit of the neuronal tubulin polyglutamylase complex. Modifies alpha- and beta-tubulin, generating side chains of glutamate on the gamma-carboxyl groups of specific glutamate residues within the C-terminal tail of alpha- and beta-tubulin (By similarity); Tubulin tyrosine ligase family (423 aa)
     
  0.983
NICN1
Nicolin-1; Nicolin 1 (213 aa)
       
    0.982
TPGS2
Tubulin polyglutamylase complex subunit 2 (304 aa)
       
    0.981
C11orf49
UPF0705 protein C11orf49; Chromosome 11 open reading frame 49; Belongs to the UPF0705 family (337 aa)
       
 
  0.914
KIAA1841
Uncharacterized protein KIAA1841; KIAA1841 (718 aa)
     
      0.851
TBC1D19
TBC1 domain family member 19; May act as a GTPase-activating protein for Rab family protein(s) (526 aa)
     
      0.843
CCDC148
Coiled-coil domain containing 148 (591 aa)
           
  0.768
THAP10
THAP domain containing 10 (257 aa)
     
   
  0.741
EIF3F
Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2-GTP-methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (357 aa)
     
      0.732
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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