• Version:
  • 11.0 [archived version]
STRINGSTRING
C18orf63 C18orf63 TMEM151B TMEM151B SLFNL1 SLFNL1 TP53BP1 TP53BP1 SLFN12L SLFN12L INAFM1 INAFM1 CNP CNP HAND1 HAND1 CCDC146 CCDC146 OAS3 OAS3 OAS2 OAS2
"SLFN12L" - Schlafen family member 12 like in Homo sapiens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
SLFN12LSchlafen family member 12 like; Belongs to the Schlafen family (588 aa)    
Predicted Functional Partners:
TP53BP1
TP53-binding protein 1; Double-strand break (DSB) repair protein involved in response to DNA damage, telomere dynamics and class-switch recombination (CSR) during antibody genesis. Plays a key role in the repair of double-strand DNA breaks (DSBs) in response to DNA damage by promoting non-homologous end joining (NHEJ)-mediated repair of DSBs and specifically counteracting the function of the homologous recombination (HR) repair protein BRCA1. In response to DSBs, phosphorylation by ATM promotes interaction with RIF1 and dissociation from NUDT16L1/TIRR, leading to recruitment to DSBs si [...] (1977 aa)
       
      0.673
OAS3
2’-5’-oligoadenylate synthase 3; Interferon-induced, dsRNA-activated antiviral enzyme which plays a critical role in cellular innate antiviral response. In addition, it may also play a role in other cellular processes such as apoptosis, cell growth, differentiation and gene regulation. Synthesizes preferentially dimers of 2’-5’- oligoadenylates (2-5A) from ATP which then bind to the inactive monomeric form of ribonuclease L (RNase L) leading to its dimerization and subsequent activation. Activation of RNase L leads to degradation of cellular as well as viral RNA, resulting in the inhib [...] (1087 aa)
     
   
  0.614
CNP
2’,3’-cyclic-nucleotide 3’-phosphodiesterase; May participate in RNA metabolism in the myelinating cell, CNP is the third most abundant protein in central nervous system myelin (421 aa)
           
  0.537
C18orf63
Uncharacterized protein C18orf63; Chromosome 18 open reading frame 63 (685 aa)
           
  0.497
INAFM1
Putative transmembrane protein INAFM1; InaF motif containing 1 (142 aa)
           
  0.476
SLFNL1
Schlafen-like protein 1; Schlafen family (407 aa)
           
  0.473
TMEM151B
Transmembrane protein 151B; Belongs to the TMEM151 family (566 aa)
           
  0.471
HAND1
Heart- and neural crest derivatives-expressed protein 1; Transcription factor that plays an essential role in both trophoblast-giant cells differentiation and in cardiac morphogenesis. In the adult, could be required for ongoing expression of cardiac-specific genes. Binds the DNA sequence 5’- NRTCTG-3’ (non-canonical E-box) (By similarity); Basic helix-loop-helix proteins (215 aa)
           
  0.451
CCDC146
Coiled-coil domain containing 146 (955 aa)
           
  0.450
OAS2
2’-5’-oligoadenylate synthase 2; Interferon-induced, dsRNA-activated antiviral enzyme which plays a critical role in cellular innate antiviral response. In addition, it may also play a role in other cellular processes such as apoptosis, cell growth, differentiation and gene regulation. Synthesizes higher oligomers of 2’-5’-oligoadenylates (2-5A) from ATP which then bind to the inactive monomeric form of ribonuclease L (RNase L) leading to its dimerization and subsequent activation. Activation of RNase L leads to degradation of cellular as well as viral RNA, resulting in the inhibition [...] (719 aa)
     
   
  0.444
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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