• Version:
  • 11.0 [archived version]
STRINGSTRING
RPS9 RPS9 RPS13 RPS13 RPS6 RPS6 RPS25 RPS25 FAU FAU RPS15 RPS15 RPS23 RPS23 RPS16 RPS16 RPS17 RPS17 RPS2 RPS2 RPL13 RPL13
"FAU" - Ubiquitin-like protein FUBI in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAUUbiquitin-like protein FUBI; FAU, ubiquitin like and ribosomal protein S30 fusion (133 aa)    
Predicted Functional Partners:
RPS17
Ribosomal protein S17 (135 aa)
     
  0.999
RPS25
Ribosomal protein S25 (125 aa)
     
  0.999
RPS13
Ribosomal protein S13 (151 aa)
     
  0.999
RPS16
Ribosomal protein S16 (146 aa)
     
  0.999
RPS23
40S ribosomal protein S23; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...] (143 aa)
     
  0.999
RPS2
Ribosomal protein S2 (293 aa)
     
  0.999
RPS6
40S ribosomal protein S6; May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA; S ribosomal proteins (249 aa)
     
  0.999
RPS15
Ribosomal protein S15 (145 aa)
     
  0.999
RPL13
Ribosomal protein L13 (211 aa)
     
  0.999
RPS9
Ribosomal protein S9 (194 aa)
     
  0.999
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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