• Version:
  • 11.0 [archived version]
STRINGSTRING
ZBTB18 ZBTB18 AUH AUH ZBTB34 ZBTB34 SOX4 SOX4 HMGB4 HMGB4 SHCBP1L SHCBP1L ACTL9 ACTL9 DNAJC5G DNAJC5G FAM71B FAM71B C1orf141 C1orf141 C10orf82 C10orf82
"HMGB4" - Canonical high mobility group in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
HMGB4Canonical high mobility group; Belongs to the HMGB family (186 aa)    
Predicted Functional Partners:
SOX4
Transcription factor SOX-4; Transcriptional activator that binds with high affinity to the T-cell enhancer motif 5’-AACAAAG-3’ motif; SRY-boxes (474 aa)
       
 
  0.609
FAM71B
Protein FAM71B; May be involved in RNA biogenesis (605 aa)
     
   
  0.561
C10orf82
Uncharacterized protein C10orf82; Chromosome 10 open reading frame 82 (154 aa)
     
   
  0.531
ZBTB34
Zinc finger and BTB domain-containing protein 34; May be a transcriptional repressor; BTB domain containing (500 aa)
       
 
  0.526
DNAJC5G
DnaJ heat shock protein family member C5 gamma (189 aa)
     
   
  0.522
AUH
Methylglutaconyl-CoA hydratase, mitochondrial; Catalyzes the conversion of 3-methylglutaconyl-CoA to 3- hydroxy-3-methylglutaryl-CoA. Also has itaconyl-CoA hydratase activity by converting itaconyl-CoA into citramalyl-CoA in the C5- dicarboxylate catabolism pathway. The C5- dicarboxylate catabolism pathway is required to detoxify itaconate, a vitamin B12-poisoning metabolite. Has very low enoyl-CoA hydratase activity. Was originally identified as RNA-binding protein that binds in vitro to clustered 5’-AUUUA-3’ motifs (339 aa)
       
 
  0.522
SHCBP1L
Testicular spindle-associated protein SHCBP1L; Testis-specific spindle-associated factor that plays a role in spermatogenesis. In association with HSPA2, participates in the maintenance of spindle integrity during meiosis in male germ cells (653 aa)
           
  0.491
C1orf141
Uncharacterized protein C1orf141; Chromosome 1 open reading frame 141 (400 aa)
     
   
  0.482
ACTL9
Actin-like protein 9; Actin related proteins (416 aa)
     
 
  0.468
ZBTB18
Zinc finger and BTB domain-containing protein 18; Transcriptional repressor that plays a role in various developmental processes such as myogenesis and brain development. Plays a key role in myogenesis by directly repressing the expression of ID2 and ID3, 2 inhibitors of skeletal myogenesis. Also involved in controlling cell division of progenitor cells and regulating the survival of postmitotic cortical neurons. Specifically binds the consensus DNA sequence 5’- [AC]ACATCTG[GT][AC]-3’ which contains the E box core, and acts by recruiting chromatin remodeling multiprotein complexes. May [...] (531 aa)
       
 
  0.465
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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