• Version:
  • 11.0 [archived version]
STRINGSTRING
PCDHGB3 PCDHGB3 PCDHGB5 PCDHGB5 SH3GL2 SH3GL2 C15orf59 C15orf59 CNTLN CNTLN TMEM202 TMEM202 PCDHGB4 PCDHGB4 PARP6 PARP6 OR13J1 OR13J1 OR6X1 OR6X1 SLC25A2 SLC25A2
"PCDHGB4" - Protocadherin gamma-B4 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDHGB4Protocadherin gamma-B4; Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain; Clustered protocadherins (923 aa)    
Predicted Functional Partners:
PCDHGB5
Protocadherin gamma-B5; Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain; Clustered protocadherins (923 aa)
     
 
0.634
PCDHGB3
Protocadherin gamma-B3; Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain; Clustered protocadherins (929 aa)
     
 
0.586
SLC25A2
Mitochondrial ornithine transporter 2; Ornithine transport across inner mitochondrial membrane, from the cytoplasm to the matrix; Belongs to the mitochondrial carrier (TC 2.A.29) family (301 aa)
           
  0.555
TMEM202
Transmembrane protein 202 (273 aa)
           
  0.541
OR6X1
Olfactory receptor 6X1; Odorant receptor; Olfactory receptors, family 6 (312 aa)
           
  0.512
C15orf59
UPF0583 protein C15orf59; Chromosome 15 open reading frame 59 (293 aa)
           
  0.470
PARP6
poly(ADP-ribose) polymerase family member 6 (630 aa)
           
  0.460
OR13J1
Olfactory receptor 13J1; Odorant receptor; Olfactory receptors, family 13 (312 aa)
           
  0.445
CNTLN
Centlein; Required for centrosome cohesion and recruitment of CEP68 to centrosomes (1406 aa)
           
  0.437
SH3GL2
Endophilin-A1; Implicated in synaptic vesicle endocytosis. May recruit other proteins to membranes with high curvature. Required for BDNF-dependent dendrite outgrowth. Cooperates with SH3GL2 to mediate BDNF-NTRK2 early endocytic trafficking and signaling from early endosomes; N-BAR domain containing (352 aa)
           
  0.436
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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