• Version:
  • 11.0 [archived version]
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TMEM164 TMEM164 AMMECR1 AMMECR1 PCDH10 PCDH10 GPR112 GPR112 RGAG1 RGAG1 ZCCHC12 ZCCHC12 PNMAL1 PNMAL1 LDOC1 LDOC1 ZCCHC16 ZCCHC16 LDOC1L LDOC1L FAM127A FAM127A
"RGAG1" - Retrotransposon Gag-like protein 9 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
RGAG1Retrotransposon Gag-like protein 9; Retrotransposon gag domain containing 1 (1388 aa)    
Predicted Functional Partners:
LDOC1L
Retrotransposon Gag-like protein 6; Leucine zipper, down-regulated in cancer 1-like (239 aa)
     
   
  0.814
FAM127A
Retrotransposon Gag-like protein 8B; Family with sequence similarity 127, member A; Belongs to the FAM127 family (113 aa)
     
   
  0.780
PNMAL1
Paraneoplastic antigen-like protein 8A; Paraneoplastic Ma antigen family-like 1 (439 aa)
     
   
  0.769
ZCCHC16
Retrotransposon Gag-like protein 4; Involved in cognitive function in the brain, possibly via the noradrenergic system (310 aa)
           
  0.702
AMMECR1
AMME syndrome candidate gene 1 protein; Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 (333 aa)
     
   
  0.690
TMEM164
Transmembrane protein 164; Belongs to the TMEM164 family (297 aa)
     
   
  0.687
PCDH10
Protocadherin-10; Potential calcium-dependent cell-adhesion protein; Non-clustered protocadherins (1040 aa)
     
   
  0.672
GPR112
Adhesion G-protein coupled receptor G4; Orphan receptor; Belongs to the G-protein coupled receptor 2 family. Adhesion G-protein coupled receptor (ADGR) subfamily (3080 aa)
     
        0.632
ZCCHC12
Zinc finger CCHC domain-containing protein 12; Transcriptional coactivator in the bone morphogenetic protein (BMP)-signaling pathway. It positively modulates BMP signaling by interacting with SMAD1 and associating with CBP in the transcription complex. It contributes to the BMP-induced enhancement of cholinergic-neuron-specific gene expression (By similarity); Paraneoplastic Ma antigens (402 aa)
     
   
  0.617
LDOC1
Protein LDOC1; May have an important role in the development and/or progression of some cancers; Belongs to the LDOC1 family (146 aa)
           
  0.602
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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