• Version:
  • 11.0 [archived version]
STRINGSTRING
SPON1 SPON1 CCDC144NL CCDC144NL GPR15 GPR15 FAM187B FAM187B ZNF80 ZNF80 SLC22A24 SLC22A24 SPERT SPERT EFCAB13 EFCAB13 NOP2 NOP2 OR7G3 OR7G3 NSUN5 NSUN5
"ZNF80" - Zinc finger protein 80 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF80Zinc finger protein 80; May be involved in transcriptional regulation; Zinc fingers C2H2-type (273 aa)    
Predicted Functional Partners:
GPR15
G-protein coupled receptor 15; Probable chemokine receptor. Alternative coreceptor with CD4 for HIV-1 infection; G protein-coupled receptors, Class A orphans (360 aa)
           
  0.669
NOP2
Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase; Involved in ribosomal large subunit assembly. S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the C(5) position of cytosine 4447 in 28S rRNA (Probable). May play a role in the regulation of the cell cycle and the increased nucleolar activity that is associated with the cell proliferation (Probable); Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (845 aa)
           
  0.634
FAM187B
Protein FAM187B; Family with sequence similarity 187 member B (369 aa)
           
  0.595
EFCAB13
EF-hand calcium-binding domain-containing protein 13; EF-hand calcium binding domain 13 (973 aa)
       
 
  0.589
CCDC144NL
Putative coiled-coil domain-containing protein 144 N-terminal-like; Coiled-coil domain containing 144 family, N-terminal like; Belongs to the CCDC144 family (221 aa)
           
  0.580
SPERT
Spermatid-associated protein; Spermatid associated (448 aa)
           
  0.564
NSUN5
Probable 28S rRNA (cytosine-C(5))-methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the C(5) position of cytosine 3782 in 28S rRNA (470 aa)
           
  0.561
SLC22A24
Solute carrier family 22 member 24 (552 aa)
           
  0.513
OR7G3
Olfactory receptor 7G3; Odorant receptor; Olfactory receptors, family 7 (312 aa)
           
  0.505
SPON1
Spondin-1; Cell adhesion protein that promotes the attachment of spinal cord and sensory neuron cells and the outgrowth of neurites in vitro. May contribute to the growth and guidance of axons in both the spinal cord and the PNS (By similarity). Major factor for vascular smooth muscle cell (807 aa)
           
  0.493
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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