• Version:
  • 11.0 [archived version]
STRINGSTRING
NBPF12 NBPF12 NBPF26 NBPF26 USO1 USO1 LRRC37A3 LRRC37A3 GOSR1 GOSR1 STX5 STX5 GOLGA6B GOLGA6B RFPL4B RFPL4B ARHGAP11B ARHGAP11B NIPA2 NIPA2 C3orf30 C3orf30
"GOLGA6B" - Golgin A6 family member B in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GOLGA6BGolgin A6 family member B; Belongs to the GOLGA6 family (693 aa)    
Predicted Functional Partners:
RFPL4B
Ret finger protein like 4B; Ring finger proteins (263 aa)
     
   
  0.548
NBPF26
Neuroblastoma breakpoint family member 14; NBPF member 14 (2988 aa)
           
  0.537
ARHGAP11B
Rho GTPase-activating protein 11B; Hominin-specific protein that promotes development and evolutionary expansion of the brain neocortex. Able to promote amplification of basal progenitors in the subventricular zone, producing more neurons during fetal corticogenesis. Does not possess GTPase activator activity; Rho GTPase activating proteins (267 aa)
           
  0.472
C3orf30
Uncharacterized protein C3orf30; Chromosome 3 open reading frame 30 (536 aa)
           
  0.472
USO1
General vesicular transport factor p115; General vesicular transport factor required for intercisternal transport in the Golgi stack; it is required for transcytotic fusion and/or subsequent binding of the vesicles to the target membrane. May well act as a vesicular anchor by interacting with the target membrane and holding the vesicular and target membranes in proximity; Armadillo-like helical domain containing (962 aa)
       
 
  0.463
NBPF12
Neuroblastoma breakpoint family member 1; NBPF member 12 (1457 aa)
           
  0.445
LRRC37A3
Leucine-rich repeat-containing protein 37A3; Leucine rich repeat containing 37 member A3 (1634 aa)
           
  0.445
STX5
Syntaxin-5; Mediates endoplasmic reticulum to Golgi transport. Together with p115/USO1 and GM130/GOLGA2, involved in vesicle tethering and fusion at the cis-Golgi membrane to maintain the stacked and inter-connected structure of the Golgi apparatus; Syntaxins (355 aa)
     
 
  0.425
GOSR1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor. May play a protective role against hydrogen peroxide induced cytotoxicity under glutathione depleted conditions in neuronal cells by regulating the intracellular ROS levels via inhibition of p38 MAPK (MAPK11, MAPK12, MAPK13 and MAPK14). Participates in docking and fusion stage of ER to cis-Golgi transport. Plays an impor [...] (250 aa)
       
 
  0.425
NIPA2
Magnesium transporter NIPA2; Acts as a selective Mg(2+) transporter; Belongs to the NIPA family (360 aa)
     
   
  0.425
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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