• Version:
  • 11.0 [archived version]
STRINGSTRING
PCDHB16 PCDHB16 MARCH10 MARCH10 AIM1L AIM1L WFDC3 WFDC3 CCT6B CCT6B SHROOM1 SHROOM1 PRSS48 PRSS48 OR11G2 OR11G2 CPAMD8 CPAMD8 DCP1B DCP1B RHBDL2 RHBDL2
"PRSS48" - Serine protease 48 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRSS48Serine protease 48; Belongs to the peptidase S1 family (328 aa)    
Predicted Functional Partners:
OR11G2
Olfactory receptor 11G2; Odorant receptor; Olfactory receptors, family 11 (345 aa)
           
  0.640
WFDC3
WAP four-disulfide core domain containing (231 aa)
           
  0.558
AIM1L
Beta/gamma crystallin domain-containing protein 2; Absent in melanoma 1-like; Belongs to the beta/gamma-crystallin family (1661 aa)
           
  0.542
MARCH10
Probable E3 ubiquitin-protein ligase MARCH10; E3 ubiquitin-protein ligase (Probable). E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfer the ubiquitin to targeted substrates; Membrane associated ring-CH-type fingers (846 aa)
           
  0.539
CCT6B
T-complex protein 1 subunit zeta-2; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin (By similarity); Chaperonins (530 aa)
       
 
  0.530
PCDHB16
Protocadherin beta-16; Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain; Clustered protocadherins (776 aa)
           
  0.518
SHROOM1
Protein Shroom1; May be involved in the assembly of microtubule arrays during cell elongation (852 aa)
           
  0.515
DCP1B
mRNA-decapping enzyme 1B; May play a role in the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. May remove the 7-methyl guanine cap structure from mRNA molecules, yielding a 5’-phosphorylated mRNA fragment and 7m-GDP (By similarity) (617 aa)
           
  0.492
RHBDL2
Rhomboid-related protein 2; Involved in regulated intramembrane proteolysis and the subsequent release of functional polypeptides from their membrane anchors. Known substrate- EFNB3; Rhomboid family (303 aa)
           
  0.482
CPAMD8
C3 and PZP like, alpha-2-macroglobulin domain containing 8; Belongs to the protease inhibitor I39 (alpha-2- macroglobulin) family (1932 aa)
       
 
  0.481
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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