• Version:
  • 11.0 [archived version]
STRINGSTRING
LRRC57 LRRC57 TMEM14B TMEM14B RPLP1 RPLP1 SRP14 SRP14 SCAF8 SCAF8 SERF2 SERF2 FUBP1 FUBP1 HYPK HYPK MFAP1 MFAP1 MATR3 MATR3 SERINC4 SERINC4
"SERF2" - Small EDRK-rich factor 2 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERF2Small EDRK-rich factor 2 (170 aa)    
Predicted Functional Partners:
HYPK
Huntingtin-interacting protein K; Has a chaperone-like activity preventing polyglutamine (polyQ) aggregation of HTT. Protects against HTT polyQ-mediated apoptosis in Neuro2a neuronal cells. Required for optimal NAA10- NAA15 complex-mediated N-terminal acetylation (129 aa)
     
   
  0.713
MATR3
Matrin-3; May play a role in transcription or may interact with other nuclear matrix proteins to form the internal fibrogranular network. In association with the SFPQ-NONO heteromer may play a role in nuclear retention of defective RNAs. Plays a role in the regulation of DNA virus-mediated innate immune response by assembling into the HDP-RNP complex, a complex that serves as a platform for IRF3 phosphorylation and subsequent innate immune response activation through the cGAS-STING pathway. May bind to specific miRNA hairpins (847 aa)
     
   
  0.650
MFAP1
Microfibrillar-associated protein 1; May be required for pre-mRNA splicing; Spliceosomal B complex (439 aa)
     
   
  0.625
SERINC4
Serine incorporator 4; Incorporates a polar amino acid serine into membranes and facilitates the synthesis of two serine-derived lipids, phosphatidylserine and sphingolipids (518 aa)
           
  0.543
RPLP1
60S acidic ribosomal protein P1; Plays an important role in the elongation step of protein synthesis; Belongs to the eukaryotic ribosomal protein P1/P2 family (114 aa)
     
   
  0.528
FUBP1
Far upstream element-binding protein 1; Regulates MYC expression by binding to a single-stranded far-upstream element (FUSE) upstream of the MYC promoter. May act both as activator and repressor of transcription (644 aa)
     
        0.503
SCAF8
Protein SCAF8; May play a role in mRNA processing; RNA binding motif containing (1349 aa)
     
        0.489
TMEM14B
Transmembrane protein 14B (151 aa)
     
   
  0.455
SRP14
Signal recognition particle 14 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding (136 aa)
     
   
  0.450
LRRC57
Leucine-rich repeat-containing protein 57; Leucine rich repeat containing 57 (239 aa)
           
  0.440
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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