• Version:
  • 11.0 [archived version]
STRINGSTRING
RPL12 RPL12 METTL10 METTL10 PCNX PCNX SETD5 SETD5 CBR1 CBR1 SETD4 SETD4 SETD6 SETD6 DYNC1LI1 DYNC1LI1 KDM7A KDM7A SLC37A3 SLC37A3 PCDH9 PCDH9
"SETD4" - SET domain containing 4 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Textmining
[Homology]
Score
SETD4SET domain containing 4 (440 aa)    
Predicted Functional Partners:
SETD6
N-lysine methyltransferase SETD6; Protein-lysine N-methyltransferase. Monomethylates ’Lys- 310’ of the RELA subunit of NF-kappa-B complex, leading to down- regulate NF-kappa-B transcription factor activity. Monomethylates ’Lys-8’ of H2AZ (H2AZK8me1). Required for the maintenance of embryonic stem cell self-renewal (By similarity); Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SETD6 subfamily (473 aa)
     
 
  0.806
SETD5
SET domain-containing protein 5; Probable transcriptional regulator that acts via the formation of large multiprotein complexes that modify and/or remodel the chromatin. Acts as a regulator of histone acetylation during gene transcription; SET domain containing (1442 aa)
     
   
  0.773
CBR1
Carbonyl reductase [NADPH] 1; NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione; Short chain dehy [...] (277 aa)
     
   
  0.707
RPL12
60S ribosomal protein L12; Binds directly to 26S ribosomal RNA (165 aa)
     
 
  0.703
DYNC1LI1
Cytoplasmic dynein 1 light intermediate chain 1; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. Probably involved in the microtubule-dependent transport of pericentrin. Is required for progress through the spindle assembly checkp [...] (523 aa)
           
  0.694
KDM7A
Lysine-specific demethylase 7A; Histone demethylase required for brain development. Specifically demethylates dimethylated ’Lys-9’ and ’Lys-27’ (H3K9me2 and H3K27me2, respectively) of histone H3 and monomethylated histone H4 ’Lys-20’ residue (H4K20Me1), thereby playing a central role in histone code. Specifically binds trimethylated ’Lys-4’ of histone H3 (H3K4me3), affecting histone demethylase specificity- in presence of H3K4me3, it has no demethylase activity toward H3K9me2, while it has high activity toward H3K27me2. Demethylates H3K9me2 in absence of H3K4me3. Has activity toward H4 [...] (941 aa)
     
   
  0.690
PCDH9
Protocadherin-9; Potential calcium-dependent cell-adhesion protein; Non-clustered protocadherins (1237 aa)
           
  0.673
SLC37A3
Sugar phosphate exchanger 3; Solute carrier family 37 member 3 (494 aa)
     
   
  0.670
METTL10
EEF1A lysine methyltransferase 2; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at ’Lys-318’ (291 aa)
     
   
  0.670
PCNX
Pecanex-like protein 1; Pecanex homolog (Drosophila); Belongs to the pecanex family (2341 aa)
           
  0.668
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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