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  • 11.0 [archived version]
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RPS11 RPS11 RPS25 RPS25 RPL13A RPL13A RPL23A RPL23A RPS18 RPS18 RPL27 RPL27 RPL8 RPL8 RPS16 RPS16 RPL7A RPL7A RPL7 RPL7 RPL13 RPL13
"RPL13A" - 60S ribosomal protein L13a in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
RPL13A60S ribosomal protein L13a; Associated with ribosomes but is not required for canonical ribosome function and has extra-ribosomal functions. Component of the GAIT (gamma interferon-activated inhibitor of translation) complex which mediates interferon-gamma-induced transcript-selective translation inhibition in inflammation processes. Upon interferon-gamma activation and subsequent phosphorylation dissociates from the ribosome and assembles into the GAIT complex which binds to stem loop-containing GAIT elements in the 3’-UTR of diverse inflammatory mRNAs (such as ceruplasmin) and suppre [...] (203 aa)    
Predicted Functional Partners:
RPS16
Ribosomal protein S16 (146 aa)
   
  0.999
RPL7
60S ribosomal protein L7; Component of the large ribosomal subunit. Binds to G-rich structures in 28S rRNA and in mRNAs. Plays a regulatory role in the translation apparatus; inhibits cell-free translation of mRNAs (248 aa)
   
  0.999
RPS11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family (158 aa)
   
  0.999
RPL13
Ribosomal protein L13 (211 aa)
     
  0.999
RPS18
40S ribosomal protein S18; Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA; S ribosomal proteins (152 aa)
   
  0.999
RPS25
Ribosomal protein S25 (125 aa)
     
  0.999
RPL23A
60S ribosomal protein L23a; This protein binds to a specific region on the 26S rRNA; Belongs to the universal ribosomal protein uL23 family (156 aa)
   
  0.999
RPL8
60S ribosomal protein L8; Component of the large ribosomal subunit (257 aa)
   
  0.999
RPL7A
Ribosomal protein L7a (266 aa)
   
  0.999
RPL27
60S ribosomal protein L27; Component of the large ribosomal subunit. Required for proper rRNA processing and maturation of 28S and 5.8S rRNAs (136 aa)
   
  0.999
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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