• Version:
  • 11.0 [archived version]
STRINGSTRING
ZCCHC16 ZCCHC16 RGAG1 RGAG1 PEG10 PEG10 PNMA6A PNMA6A FAM127C FAM127C BEX5 BEX5 ZCCHC5 ZCCHC5 TCEAL3 TCEAL3 FTHL17 FTHL17 TCEAL5 TCEAL5 ZXDA ZXDA
"FAM127C" - Retrotransposon Gag-like protein 8B in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM127CRetrotransposon Gag-like protein 8B; Family with sequence similarity 127, member C; Belongs to the FAM127 family (113 aa)    
Predicted Functional Partners:
ZCCHC5
Retrotransposon Gag-like protein 3; May function as a transcriptional regulator. Plays a role in postnatal myogenesis, may be involved in the regulation of satellite cells self-renewal (475 aa)
           
  0.709
PEG10
Retrotransposon-derived protein PEG10; Prevents apoptosis in hepatocellular carcinoma (HCC) cells through interaction with SIAH1, a mediator of apoptosis. May also have a role in cell growth promotion and hepatoma formation. Inhibits the TGF-beta signaling by interacting with the TGF-beta receptor ALK1. When overexpressed, induces the formation of cellular extension, such as filipodia in association with ALK1. Involved at the immediate early stage of adipocyte differentiation (By similarity). May bind to the 5’-GCCTGTCTTT-3’ DNA sequence of the MB1 domain in the myelin basic protein (M [...] (401 aa)
     
 
0.590
RGAG1
Retrotransposon Gag-like protein 9; Retrotransposon gag domain containing 1 (1388 aa)
           
  0.564
ZCCHC16
Retrotransposon Gag-like protein 4; Involved in cognitive function in the brain, possibly via the noradrenergic system (310 aa)
           
  0.560
TCEAL5
Transcription elongation factor A protein-like 5; May be involved in transcriptional regulation; Transcription elongation factor A like family (206 aa)
           
  0.550
PNMA6A
Paraneoplastic antigen-like protein 6A; Paraneoplastic Ma antigens; Belongs to the PNMA family (399 aa)
           
  0.542
BEX5
Protein BEX5; Brain expressed X-linked family; Belongs to the BEX family (111 aa)
           
  0.510
FTHL17
Ferritin heavy chain like 17 (183 aa)
           
  0.507
ZXDA
Zinc finger X-linked protein ZXDA; Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes; Zinc fingers C2H2-type (799 aa)
           
  0.475
TCEAL3
Transcription elongation factor A protein-like 3; May be involved in transcriptional regulation; Transcription elongation factor A like family (200 aa)
     
   
  0.464
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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