• Version:
  • 11.0 [archived version]
STRINGSTRING
RGAG1 RGAG1 SLC10A3 SLC10A3 RGAG4 RGAG4 ZC4H2 ZC4H2 MOSPD1 MOSPD1 PRRG1 PRRG1 FAM127B FAM127B PEG10 PEG10 ETF1 ETF1 ZNF606 ZNF606 ZBTB21 ZBTB21
"FAM127B" - Retrotransposon Gag-like protein 8A in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
FAM127BRetrotransposon Gag-like protein 8A; Family with sequence similarity 127, member B; Belongs to the FAM127 family (113 aa)    
Predicted Functional Partners:
RGAG4
Retrotransposon Gag-like protein 5; Retrotransposon gag domain containing 4 (569 aa)
           
  0.641
PEG10
Retrotransposon-derived protein PEG10; Prevents apoptosis in hepatocellular carcinoma (HCC) cells through interaction with SIAH1, a mediator of apoptosis. May also have a role in cell growth promotion and hepatoma formation. Inhibits the TGF-beta signaling by interacting with the TGF-beta receptor ALK1. When overexpressed, induces the formation of cellular extension, such as filipodia in association with ALK1. Involved at the immediate early stage of adipocyte differentiation (By similarity). May bind to the 5’-GCCTGTCTTT-3’ DNA sequence of the MB1 domain in the myelin basic protein (M [...] (401 aa)
       
 
0.557
MOSPD1
Motile sperm domain-containing protein 1; Plays a role in differentiation and/or proliferation of mesenchymal stem cells. Proposed to be involved in epithelial-to- mesenchymal transition (EMT). However, another study suggests that it is not required for EMT or stem cell self-renewal and acts during later stages of differentiation (213 aa)
           
  0.540
PRRG1
Transmembrane gamma-carboxyglutamic acid protein 1; Proline rich and Gla domain containing (218 aa)
           
  0.516
ETF1
Eukaryotic peptide chain release factor subunit 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA. Component of the transient SURF complex which recruits UPF1 to stalled ribosomes in the context of nonsense-mediated decay (NMD) of mRNAs containing premature stop codons (437 aa)
       
      0.513
ZNF606
Zinc finger protein 606; May act as a transcriptional repressor; Zinc fingers C2H2-type (792 aa)
           
  0.511
RGAG1
Retrotransposon Gag-like protein 9; Retrotransposon gag domain containing 1 (1388 aa)
           
  0.484
ZC4H2
Zinc finger C4H2 domain-containing protein; Plays a role in interneurons differentiation. Involved in neuronal development and in neuromuscular junction formation; Zinc fingers (224 aa)
           
  0.453
SLC10A3
P3 protein; The ubiquitous expression and the conservation of the sequence in distant animal species suggest that the gene codes for a protein with housekeeping functions; Solute carriers (477 aa)
           
  0.446
ZBTB21
Zinc finger and BTB domain-containing protein 21; Acts as a transcription repressor; BTB domain containing (1066 aa)
           
  0.420
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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