ZSCAN16 protein (human) - STRING database

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ZSCAN16

Zinc finger and SCAN domain-containing protein 16; May be involved in transcriptional regulation; SCAN domain containing (348 aa)

Predicted Functional Partners:

ZNF24

0.811

ZSCAN22

0.806

ZSCAN32

0.784

SYTL3

0.711

ZNF446

0.671

SMIM7

0.654

TMEM154

0.638

TMEM38A

0.627

DLGAP1

0.607

TNIP2

0.606

Your Current Organism:

Homo sapiens

NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but resolution at 400 dpi

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as simple tabular text output:

download

TSV: tab separated values - can be opened in Excel

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DLGAP1	SMIM7	ENSP00000316377	ENSP00000351569	Disks large-associated protein 1; Part of the postsynaptic scaffold in neuronal cells; Belongs to the SAPAP family	Small integral membrane protein 7	0.410
DLGAP1	SYTL3	ENSP00000316377	ENSP00000483936	Disks large-associated protein 1; Part of the postsynaptic scaffold in neuronal cells; Belongs to the SAPAP family	Synaptotagmin-like protein 3; May act as Rab effector protein and play a role in vesicle trafficking. Binds phospholipids in the presence of calcium ions (By similarity); Synaptotagmin like tandem C2 proteins	0.595
DLGAP1	TMEM38A	ENSP00000316377	ENSP00000187762	Disks large-associated protein 1; Part of the postsynaptic scaffold in neuronal cells; Belongs to the SAPAP family	Trimeric intracellular cation channel type A; Monovalent cation channel required for maintenance of rapid intracellular calcium release. May act as a potassium counter-ion channel that functions in synchronization with calcium release from intracellular stores	0.407
DLGAP1	ZSCAN16	ENSP00000316377	ENSP00000366527	Disks large-associated protein 1; Part of the postsynaptic scaffold in neuronal cells; Belongs to the SAPAP family	Zinc finger and SCAN domain-containing protein 16; May be involved in transcriptional regulation; SCAN domain containing	0.607
SMIM7	DLGAP1	ENSP00000351569	ENSP00000316377	Small integral membrane protein 7	Disks large-associated protein 1; Part of the postsynaptic scaffold in neuronal cells; Belongs to the SAPAP family	0.410
SMIM7	SYTL3	ENSP00000351569	ENSP00000483936	Small integral membrane protein 7	Synaptotagmin-like protein 3; May act as Rab effector protein and play a role in vesicle trafficking. Binds phospholipids in the presence of calcium ions (By similarity); Synaptotagmin like tandem C2 proteins	0.554
SMIM7	TMEM154	ENSP00000351569	ENSP00000302144	Small integral membrane protein 7	Transmembrane protein 154	0.584
SMIM7	TMEM38A	ENSP00000351569	ENSP00000187762	Small integral membrane protein 7	Trimeric intracellular cation channel type A; Monovalent cation channel required for maintenance of rapid intracellular calcium release. May act as a potassium counter-ion channel that functions in synchronization with calcium release from intracellular stores	0.558
SMIM7	ZSCAN16	ENSP00000351569	ENSP00000366527	Small integral membrane protein 7	Zinc finger and SCAN domain-containing protein 16; May be involved in transcriptional regulation; SCAN domain containing	0.654
SYTL3	DLGAP1	ENSP00000483936	ENSP00000316377	Synaptotagmin-like protein 3; May act as Rab effector protein and play a role in vesicle trafficking. Binds phospholipids in the presence of calcium ions (By similarity); Synaptotagmin like tandem C2 proteins	Disks large-associated protein 1; Part of the postsynaptic scaffold in neuronal cells; Belongs to the SAPAP family	0.595
SYTL3	SMIM7	ENSP00000483936	ENSP00000351569	Synaptotagmin-like protein 3; May act as Rab effector protein and play a role in vesicle trafficking. Binds phospholipids in the presence of calcium ions (By similarity); Synaptotagmin like tandem C2 proteins	Small integral membrane protein 7	0.554
SYTL3	TMEM154	ENSP00000483936	ENSP00000302144	Synaptotagmin-like protein 3; May act as Rab effector protein and play a role in vesicle trafficking. Binds phospholipids in the presence of calcium ions (By similarity); Synaptotagmin like tandem C2 proteins	Transmembrane protein 154	0.549
SYTL3	TMEM38A	ENSP00000483936	ENSP00000187762	Synaptotagmin-like protein 3; May act as Rab effector protein and play a role in vesicle trafficking. Binds phospholipids in the presence of calcium ions (By similarity); Synaptotagmin like tandem C2 proteins	Trimeric intracellular cation channel type A; Monovalent cation channel required for maintenance of rapid intracellular calcium release. May act as a potassium counter-ion channel that functions in synchronization with calcium release from intracellular stores	0.595
SYTL3	ZSCAN16	ENSP00000483936	ENSP00000366527	Synaptotagmin-like protein 3; May act as Rab effector protein and play a role in vesicle trafficking. Binds phospholipids in the presence of calcium ions (By similarity); Synaptotagmin like tandem C2 proteins	Zinc finger and SCAN domain-containing protein 16; May be involved in transcriptional regulation; SCAN domain containing	0.711
TMEM154	SMIM7	ENSP00000302144	ENSP00000351569	Transmembrane protein 154	Small integral membrane protein 7	0.584
TMEM154	SYTL3	ENSP00000302144	ENSP00000483936	Transmembrane protein 154	Synaptotagmin-like protein 3; May act as Rab effector protein and play a role in vesicle trafficking. Binds phospholipids in the presence of calcium ions (By similarity); Synaptotagmin like tandem C2 proteins	0.549
TMEM154	TMEM38A	ENSP00000302144	ENSP00000187762	Transmembrane protein 154	Trimeric intracellular cation channel type A; Monovalent cation channel required for maintenance of rapid intracellular calcium release. May act as a potassium counter-ion channel that functions in synchronization with calcium release from intracellular stores	0.551
TMEM154	ZSCAN16	ENSP00000302144	ENSP00000366527	Transmembrane protein 154	Zinc finger and SCAN domain-containing protein 16; May be involved in transcriptional regulation; SCAN domain containing	0.638
TMEM38A	DLGAP1	ENSP00000187762	ENSP00000316377	Trimeric intracellular cation channel type A; Monovalent cation channel required for maintenance of rapid intracellular calcium release. May act as a potassium counter-ion channel that functions in synchronization with calcium release from intracellular stores	Disks large-associated protein 1; Part of the postsynaptic scaffold in neuronal cells; Belongs to the SAPAP family	0.407
TMEM38A	SMIM7	ENSP00000187762	ENSP00000351569	Trimeric intracellular cation channel type A; Monovalent cation channel required for maintenance of rapid intracellular calcium release. May act as a potassium counter-ion channel that functions in synchronization with calcium release from intracellular stores	Small integral membrane protein 7	0.558

page 1 of 3

Network

Cooccurrence

Experiments

Coexpression

Textmining

Neighborhood

Databases

Fusion

© STRING Consortium 2020

Credits

Access

Info

About