• Version:
  • 11.0 [archived version]
STRINGSTRING
ZBTB12 ZBTB12 APOM APOM C6orf47 C6orf47 ABHD16A ABHD16A GPANK1 GPANK1 PRRC2A PRRC2A ASCC3 ASCC3 SFXN5 SFXN5 B3GAT2 B3GAT2 RARS2 RARS2 CNPY3 CNPY3
"GPANK1" - G-patch domain and ankyrin repeats 1 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
GPANK1G-patch domain and ankyrin repeats 1 (356 aa)    
Predicted Functional Partners:
APOM
Apolipoprotein M; Probably involved in lipid transport. Can bind sphingosine-1-phosphate, myristic acid, palmitic acid and stearic acid, retinol, all-trans-retinoic acid and 9-cis-retinoic acid; Apolipoproteins (188 aa)
           
  0.931
ABHD16A
Protein ABHD16A; Abhydrolase domain containing 16A (558 aa)
           
  0.883
ZBTB12
Zinc finger and BTB domain-containing protein 12; May be involved in transcriptional regulation; BTB domain containing (459 aa)
           
  0.804
PRRC2A
Protein PRRC2A; May play a role in the regulation of pre-mRNA splicing (2157 aa)
           
  0.794
C6orf47
Uncharacterized protein C6orf47; Chromosome 6 open reading frame 47 (294 aa)
     
   
  0.670
SFXN5
Sideroflexin-5; Transports citrate. Potential iron transporter (By similarity); Sideroflexins (340 aa)
           
  0.653
B3GAT2
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2; Involved in the biosynthesis of L2/HNK-1 carbohydrate epitope on both glycolipids and glycoproteins; Beta-1,3-glucuronyltransferases (323 aa)
           
  0.646
CNPY3
Protein canopy homolog 3; Toll-like receptor (TLR)-specific co-chaperone for HSP90B1. Required for proper TLR folding, except that of TLR3, and hence controls TLR exit from the endoplasmic reticulum. Consequently, required for both innate and adaptive immune responses (By similarity); Belongs to the canopy family (278 aa)
           
  0.629
RARS2
Probable arginine--tRNA ligase, mitochondrial; arginyl-tRNA synthetase 2, mitochondrial; Aminoacyl tRNA synthetases, Class I (578 aa)
           
  0.628
ASCC3
Activating signal cointegrator 1 complex subunit 3; 3’-5’ DNA helicase involved in repair of alkylated DNA. Promotes DNA unwinding to generate single-stranded substrate needed for ALKBH3, enabling ALKBH3 to process alkylated N3- methylcytosine (3mC) within double-stranded regions. Enhances NF- kappa-B, SRF and AP1 transactivation; Belongs to the helicase family (2202 aa)
           
  0.609
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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