• Version:
  • 11.0 [archived version]
STRINGSTRING
RPS21 RPS21 RPS25 RPS25 RPL14 RPL14 RPL10 RPL10 RPL30 RPL30 RPS13 RPS13 EEFSEC EEFSEC RPS12 RPS12 SECISBP2 SECISBP2 RPL7A RPL7A RPL12 RPL12
"SECISBP2" - Selenocysteine insertion sequence-binding protein 2 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SECISBP2Selenocysteine insertion sequence-binding protein 2; Binds to the SECIS element in the 3’-UTR of some mRNAs encoding selenoproteins. Binding is stimulated by SELB (854 aa)    
Predicted Functional Partners:
EEFSEC
Selenocysteine-specific elongation factor; Translation factor necessary for the incorporation of selenocysteine into proteins. It probably replaces EF-Tu for the insertion of selenocysteine directed by the UGA codon. SelB binds GTP and GDP (596 aa)
         
  0.997
RPL30
Ribosomal protein L30; Belongs to the eukaryotic ribosomal protein eL30 family (115 aa)
         
  0.979
RPL7A
Ribosomal protein L7a (266 aa)
         
  0.961
RPS13
Ribosomal protein S13 (151 aa)
         
  0.909
RPS25
Ribosomal protein S25 (125 aa)
         
  0.909
RPS21
Ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family (83 aa)
         
  0.908
RPL14
60S ribosomal protein L14; Component of the large ribosomal subunit; Belongs to the eukaryotic ribosomal protein eL14 family (215 aa)
         
  0.908
RPL12
60S ribosomal protein L12; Binds directly to 26S ribosomal RNA (165 aa)
         
  0.906
RPS12
Ribosomal protein S12 (132 aa)
         
  0.902
RPL10
60S ribosomal protein L10; Component of the large ribosomal subunit. Plays a role in the formation of actively translating ribosomes. May play a role in the embryonic brain development (214 aa)
         
  0.900
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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