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STRINGSTRING
RMND1 RMND1 C6orf203 C6orf203 THAP8 THAP8 CLUH CLUH FGD4 FGD4 C9orf16 C9orf16 DNAL4 DNAL4 C1orf115 C1orf115 ATP6V1E2 ATP6V1E2 ENSG00000124208 ENSG00000124208 CXorf56 CXorf56
"C9orf16" - UPF0184 protein C9orf16 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C9orf16UPF0184 protein C9orf16; Chromosome 9 open reading frame 16 (83 aa)    
Predicted Functional Partners:
ATP6V1E2
V-type proton ATPase subunit E 2; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. This isoform is essential for energy coupling involved in acidification of acrosome (By similarity) (226 aa)
        
      0.686
C6orf203
Uncharacterized protein C6orf203; Chromosome 6 open reading frame 203 (240 aa)
            
  0.626
CXorf56
UPF0428 protein CXorf56; Chromosome X open reading frame 56; Spliceosomal C complex (208 aa)
            
  0.573
ENSG00000124208
TMEM189-UBE2V1 readthrough; Belongs to the ubiquitin-conjugating enzyme family (370 aa)
            
  0.552
FGD4
FYVE, RhoGEF and PH domain-containing protein 4; Activates CDC42, a member of the Ras-like family of Rho- and Rac proteins, by exchanging bound GDP for free GTP. Plays a role in regulating the actin cytoskeleton and cell shape. Activates MAPK8 (By similarity); Pleckstrin homology domain containing (766 aa)
        
      0.544
C1orf115
Uncharacterized protein C1orf115; Chromosome 1 open reading frame 115 (142 aa)
            
  0.535
THAP8
THAP domain containing 8 (274 aa)
        
      0.534
DNAL4
Dynein light chain 4, axonemal; Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity (By similarity); Dyneins, axonemal (105 aa)
            
  0.528
CLUH
Clustered mitochondria protein homolog; mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria. Specifically binds mRNAs of nuclear- encoded mitochondrial proteins in the cytoplasm and regulates transport or translation of these transcripts close to mitochondria, playing a role in mitochondrial biogenesis (1309 aa)
            
  0.514
RMND1
Required for meiotic nuclear division protein 1 homolog; Required for mitochondrial translation, possibly by coordinating the assembly or maintenance of the mitochondrial ribosome; Belongs to the RMD1/sif2 family (449 aa)
            
  0.514
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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