• Version:
  • 11.0 [archived version]
STRINGSTRING
RPS26 RPS26 RPS25 RPS25 RPS18 RPS18 RPL17 RPL17 RPL23 RPL23 RPS19 RPS19 RPL8 RPL8 RPL21 RPL21 RPL10A RPL10A RPS27 RPS27 SERBP1 SERBP1
"SERBP1" - Plasminogen activator inhibitor 1 RNA-binding protein in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERBP1Plasminogen activator inhibitor 1 RNA-binding protein; May play a role in the regulation of mRNA stability. Binds to the 3’-most 134 nt of the SERPINE1/PAI1 mRNA, a region which confers cyclic nucleotide regulation of message decay (408 aa)    
Predicted Functional Partners:
RPL21
60S ribosomal protein L21; Component of the large ribosomal subunit (160 aa)
     
 
  0.977
RPS25
Ribosomal protein S25 (125 aa)
     
      0.974
RPL8
60S ribosomal protein L8; Component of the large ribosomal subunit (257 aa)
     
 
  0.973
RPS18
40S ribosomal protein S18; Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA; S ribosomal proteins (152 aa)
     
      0.972
RPL23
Ribosomal protein L23 (140 aa)
     
      0.972
RPL17
60S ribosomal protein L17; Component of the large ribosomal subunit; Belongs to the universal ribosomal protein uL22 family (184 aa)
     
      0.972
RPS19
40S ribosomal protein S19; Required for pre-rRNA processing and maturation of 40S ribosomal subunits; Belongs to the eukaryotic ribosomal protein eS19 family (145 aa)
     
      0.972
RPS27
40S ribosomal protein S27; Component of the small ribosomal subunit. Required for proper rRNA processing and maturation of 18S rRNAs; Belongs to the eukaryotic ribosomal protein eS27 family (84 aa)
     
      0.971
RPL10A
60S ribosomal protein L10a; Component of the large ribosomal subunit (217 aa)
     
 
  0.970
RPS26
Ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family (115 aa)
     
 
  0.970
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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