• Version:
  • 11.0 [archived version]
STRINGSTRING
SAMD7 SAMD7 SAMD5 SAMD5 TMEM151A TMEM151A SAMD10 SAMD10 ARHGAP27 ARHGAP27 SOWAHD SOWAHD ANKDD1A ANKDD1A HMHA1 HMHA1 CCDC135 CCDC135 CAPN8 CAPN8 TAGAP TAGAP
"SAMD10" - Sterile alpha motif domain containing 10 in Homo sapiens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
SAMD10Sterile alpha motif domain containing 10 (202 aa)    
Predicted Functional Partners:
SOWAHD
Ankyrin repeat domain-containing protein SOWAHD; Sosondowah ankyrin repeat domain family member D; Belongs to the SOWAH family (315 aa)
     
   
  0.769
SAMD7
Sterile alpha motif domain-containing protein 7; Involved in the regulation of gene expression in the retina. It functions as a negative regulator of CRX-controlled genes; Sterile alpha motif domain containing (446 aa)
           
  0.757
ANKDD1A
Ankyrin repeat and death domain containing 1A (522 aa)
           
  0.726
SAMD5
Sterile alpha motif domain containing 5 (173 aa)
           
  0.709
CCDC135
Dynein regulatory complex subunit 7; Key component of the nexin-dynein regulatory complex (N- DRC), essential for N-DRC integrity. Involved in the regulation of flagellar motility; Belongs to the DRC7 family (874 aa)
           
  0.648
HMHA1
Rho GTPase-activating protein 45; Contains a GTPase activator for the Rho-type GTPases (RhoGAP) domain that would be able to negatively regulate the actin cytoskeleton as well as cell spreading. However, also contains N-terminally a BAR-domin which is able to play an autoinhibitory effect on this RhoGAP activity (1152 aa)
           
  0.625
CAPN8
Calpain-8; Calcium-regulated non-lysosomal thiol-protease. Involved in membrane trafficking in the gastric surface mucus cells (pit cells) and may involve the membrane trafficking of mucus cells via interactions with coat protein. Proteolytically cleaves the beta- subunit of coatomer complex (By similarity); Belongs to the peptidase C2 family (703 aa)
           
  0.592
TMEM151A
Transmembrane protein 151A (468 aa)
           
  0.585
ARHGAP27
Rho GTPase-activating protein 27; Rho GTPase-activating protein which may be involved in clathrin-mediated endocytosis. GTPase activators for the Rho-type GTPases act by converting them to an inactive GDP-bound state. Has activity toward CDC42 and RAC1 (By similarity); Pleckstrin homology domain containing (889 aa)
           
  0.575
TAGAP
T-cell activation Rho GTPase-activating protein; May function as a GTPase-activating protein and may play important roles during T-cell activation (731 aa)
           
  0.574
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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