• Version:
  • 11.0 [archived version]
STRINGSTRING
IFFO1 IFFO1 C1orf109 C1orf109 LRRC61 LRRC61 ACTR3C ACTR3C ZNF831 ZNF831 PIWIL3 PIWIL3 SCML4 SCML4 ODF3B ODF3B ZNF367 ZNF367 TMED3 TMED3 ZNF560 ZNF560
"SCML4" - Sex comb on midleg-like protein 4 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCML4Sex comb on midleg-like protein 4; Putative Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development (By similarity); Sterile alpha motif domain containing (414 aa)    
Predicted Functional Partners:
ZNF367
Zinc finger protein 367; Transcriptional activator. Isoform 1 may be involved in transcriptional activation of erythroid genes; Zinc fingers C2H2-type (350 aa)
     
 
  0.736
LRRC61
Leucine-rich repeat-containing protein 61; Leucine rich repeat containing 61 (259 aa)
     
   
  0.619
ACTR3C
Actin-related protein 3C; May play a role in the suppression of metastatic potential in lung adenoma carcinoma cells; Actin related proteins (210 aa)
           
  0.531
ODF3B
Outer dense fiber of sperm tails 3B (253 aa)
           
  0.519
PIWIL3
Piwi-like protein 3; May play a role during spermatogenesis by repressing transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and govern the methylation and subsequent repression of transposons. Directly binds piRNAs, a class of 24 to 30 nucleotide RNAs that are generated by a Dicer-independent mechanism and are primarily derived from transposons and other repeated sequen [...] (882 aa)
       
 
  0.510
ZNF831
Zinc finger protein 831 (1677 aa)
     
 
  0.508
ZNF560
Zinc finger protein 560; May be involved in transcriptional regulation; Zinc fingers C2H2-type (790 aa)
       
 
  0.496
TMED3
Transmembrane emp24 domain-containing protein 3; Potential role in vesicular protein trafficking, mainly in the early secretory pathway. Contributes to the coupled localization of TMED2 and TMED10 in the cis-Golgi network; Belongs to the EMP24/GP25L family (217 aa)
           
  0.475
IFFO1
Intermediate filament family orphan 1; Belongs to the intermediate filament family (571 aa)
           
  0.473
C1orf109
Uncharacterized protein C1orf109; May promote cancer cell proliferation by controlling the G1 to S phase transition (203 aa)
           
  0.473
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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