• Version:
  • 11.0 [archived version]
STRINGSTRING
ZNF639 ZNF639 DNAJC16 DNAJC16 HABP4 HABP4 ZZEF1 ZZEF1 SCRN3 SCRN3 TLDC1 TLDC1 RAB3GAP2 RAB3GAP2 SDR42E1 SDR42E1 HDHD3 HDHD3 TBC1D24 TBC1D24 PATZ1 PATZ1
"TLDC1" - TLD domain-containing protein 1 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLDC1TLD domain-containing protein 1; TBC/LysM-associated domain containing 1 (456 aa)    
Predicted Functional Partners:
HDHD3
Haloacid dehalogenase like hydrolase domain containing 3 (251 aa)
           
  0.760
PATZ1
POZ-, AT hook-, and zinc finger-containing protein 1; Transcriptional repressor; Belongs to the krueppel C2H2-type zinc-finger protein family (687 aa)
           
  0.726
RAB3GAP2
Rab3 GTPase-activating protein non-catalytic subunit; Regulatory subunit of a GTPase activating protein that has specificity for Rab3 subfamily (RAB3A, RAB3B, RAB3C and RAB3D). Rab3 proteins are involved in regulated exocytosis of neurotransmitters and hormones. Rab3 GTPase-activating complex specifically converts active Rab3-GTP to the inactive form Rab3- GDP. Required for normal eye and brain development. May participate in neurodevelopmental processes such as proliferation, migration and differentiation before synapse formation, and non- synaptic vesicular release of neurotransmitters (1393 aa)
           
  0.689
ZZEF1
Zinc finger ZZ-type and EF-hand domain containing 1 (2961 aa)
           
  0.658
SCRN3
Secernin-3; Secernin 3 (424 aa)
           
  0.653
SDR42E1
Short chain dehydrogenase/reductase family 42E, member 1 (393 aa)
     
   
  0.643
ZNF639
Zinc finger protein 639; Binds DNA and may function as a transcriptional repressor; Belongs to the krueppel C2H2-type zinc-finger protein family (485 aa)
           
  0.573
DNAJC16
DnaJ heat shock protein family member C16 (782 aa)
     
   
  0.556
TBC1D24
TBC1 domain family member 24; May act as a GTPase-activating protein for Rab family protein(s). Involved in neuronal projections development, probably through a negative modulation of ARF6 function; Deafness associated genes (559 aa)
           
  0.555
HABP4
Intracellular hyaluronan-binding protein 4; RNA-binding protein that plays a role in the regulation of transcription, pre-mRNA splicing and mRNA translation. Negatively regulates DNA-binding activity of the transcription factor MEF2C in myocardial cells in response to mechanical stress (By similarity). Plays a role in pre-mRNA splicing regulation. Binds (via C-terminus) to poly(U) RNA. Involved in mRNA translation regulation, probably at the initiation step (413 aa)
           
  0.509
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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