• Version:
  • 11.0 [archived version]
STRINGSTRING
MYL12B MYL12B CLEC18B CLEC18B RNF152 RNF152 TMEM52B TMEM52B TMEM72 TMEM72 SMIM34B SMIM34B C9orf66 C9orf66
"CLEC18B" - C-type lectin domain family 18 member B in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLEC18BC-type lectin domain family 18 member B; Binds polysaccharides in a Ca(2+)-independent manner (By similarity); C-type lectin domain containing (455 aa)    
Predicted Functional Partners:
SMIM34B
annotation not available (139 aa)
           
  0.669
TMEM52B
Transmembrane protein 52B (183 aa)
           
  0.568
C9orf66
Uncharacterized protein C9orf66; Chromosome 9 open reading frame 66 (295 aa)
           
  0.557
TMEM72
Transmembrane protein 72 (275 aa)
           
  0.523
MYL12B
Myosin regulatory light chain 12B; Myosin regulatory subunit that plays an important role in regulation of both smooth muscle and nonmuscle cell contractile activity via its phosphorylation. Phosphorylation triggers actin polymerization in vascular smooth muscle. Implicated in cytokinesis, receptor capping, and cell locomotion; EF-hand domain containing (172 aa)
       
 
  0.440
RNF152
E3 ubiquitin-protein ligase RNF152; E3 ubiquitin-protein ligase mediating ’Lys-63’-linked polyubiquitination of RRAGA in response to amino acid starvation. Thereby, regulates mTORC1 signaling and plays a role in the cellular response to amino acid availability. Also mediates ’Lys-48’-linked polyubiquitination of target proteins and their subsequent targeting to the proteasome for degradation. Induces apoptosis when overexpressed; Ring finger proteins (203 aa)
     
   
  0.421
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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