• Version:
  • 11.0 [archived version]
STRINGSTRING
TMEM128 TMEM128 FADS6 FADS6 OR1D5 OR1D5 CDR2L CDR2L HID1 HID1 USH1G USH1G OTOP2 OTOP2 CTCF CTCF MS4A12 MS4A12 TMIGD1 TMIGD1 GUCA2B GUCA2B
"OTOP2" - Otopetrin-2 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTOP2Otopetrin-2; Otopetrin 2 (562 aa)    
Predicted Functional Partners:
HID1
Protein HID1; May play an important role in the development of cancers in a broad range of tissues (788 aa)
           
  0.819
CDR2L
Cerebellar degeneration related protein 2 like (465 aa)
     
   
  0.792
TMEM128
Transmembrane protein 128 (165 aa)
           
  0.743
USH1G
Usher syndrome type-1G protein; Required for normal development and maintenance of cochlear hair cell bundles. Anchoring/scaffolding protein that is a part of the functional network formed by USH1C, USH1G, CDH23 and MYO7A that mediates mechanotransduction in cochlear hair cells. Required for normal hearing; Ankyrin repeat domain containing (461 aa)
     
   
  0.686
TMIGD1
Transmembrane and immunoglobulin domain-containing protein 1; May control cell-cell adhesion, cell migration and proliferation, cell morphology, and protects renal epithelial cells from oxidative cell injury to promote cell survival; I-set domain containing (262 aa)
     
   
  0.657
OR1D5
Olfactory receptor 1D5; Odorant receptor; Olfactory receptors, family 1 (312 aa)
           
  0.630
FADS6
Fatty acid desaturase 6; Belongs to the fatty acid desaturase type 1 family (368 aa)
           
  0.626
GUCA2B
Guanylate cyclase activator 2B; Endogenous activator of intestinal guanylate cyclase. It stimulates this enzyme through the same receptor binding region as the heat-stable enterotoxins. May be a potent physiological regulator of intestinal fluid and electrolyte transport. May be an autocrine/paracrine regulator of intestinal salt and water transport (112 aa)
     
   
  0.618
MS4A12
Membrane-spanning 4-domains subfamily A member 12; May be involved in signal transduction as a component of a multimeric receptor complex; Belongs to the MS4A family (267 aa)
     
   
  0.601
CTCF
Transcriptional repressor CTCF; Chromatin binding factor that binds to DNA sequence specific sites. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Acts as transcriptional repressor binding to promoters of vertebrate MYC gene and BAG1 gene. Also binds to the PLK and PIM1 promoters. Acts as a transcriptional activator of APP. Regulates APOA1/C3/A4/A5 gene cluster and controls MHC class II gene expression. Plays an essential role in oocyte and preimplantation embryo development by ac [...] (727 aa)
           
  0.581
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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