• Version:
  • 11.0 [archived version]
STRINGSTRING
LRRC71 LRRC71 PPAPDC1A PPAPDC1A HORMAD2 HORMAD2 NKPD1 NKPD1 SUSD5 SUSD5 GEMIN7 GEMIN7 CLASRP CLASRP CLPTM1 CLPTM1 ZNF296 ZNF296 CCDC8 CCDC8 TRAPPC6A TRAPPC6A
"NKPD1" - NTPase KAP family P-loop domain containing 1 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
NKPD1NTPase KAP family P-loop domain containing 1 (832 aa)    
Predicted Functional Partners:
CLASRP
CLK4-associating serine/arginine rich protein; Probably functions as an alternative splicing regulator. May regulate the mRNA splicing of genes such as CLK1. May act by regulating members of the CLK kinase family (By similarity); Belongs to the splicing factor SR family (674 aa)
           
  0.778
TRAPPC6A
Trafficking protein particle complex subunit 6A; May play a role in vesicular transport during the biogenesis of melanosomes; Trafficking protein particle complex (173 aa)
 
 
   
  0.770
CLPTM1
Cleft lip and palate transmembrane protein 1; May play a role in T-cell development; Belongs to the CLPTM1 family (669 aa)
     
   
  0.732
CCDC8
Coiled-coil domain-containing protein 8; Core component of the 3M complex, a complex required to regulate microtubule dynamics and genome integrity. It is unclear how the 3M complex regulates microtubules, it could act by controlling the level of a microtubule stabilizer. Required for localization of CUL7 to the centrosome; Protein phosphatase 1 regulatory subunits (538 aa)
       
      0.731
ZNF296
Zinc finger protein 296; May be a transcriptional corepressor with KLF4; Zinc fingers C2H2-type (475 aa)
     
 
  0.679
GEMIN7
Gem-associated protein 7; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs. Most spliceosomal snRNPs contain a common set of Sm proteins SNRPB, SNRPD1, SNRPD2, SNRPD3, SNRPE, SNRPF and SNRPG that assemble in a heptameric protein ring on the Sm site of the small nuclear RNA to form the core snRNP. In the cytosol, the Sm proteins SNRPD1, SNRPD2, SNRPE, SNRPF and SNRPG are trapped in an inactive 6S pICln-Sm complex by the chapero [...] (131 aa)
           
  0.605
SUSD5
Sushi domain containing 5 (629 aa)
           
  0.575
PPAPDC1A
Phospholipid phosphatase 4; Displays magnesium-independent phosphatidate phosphatase activity in vitro. Catalyzes the conversion of phosphatidic acid to diacylglycerol; Belongs to the PA-phosphatase related phosphoesterase family (271 aa)
       
 
  0.560
HORMAD2
HORMA domain-containing protein 2; Essential for synapsis surveillance during meiotic prophase via the recruitment of ATR activity. Plays a key role in the male mid-pachytene checkpoint and the female meiotic prophase checkpoint- required for efficient build-up of ATR activity on unsynapsed chromosome regions, a process believed to form the basis of meiotic silencing of unsynapsed chromatin (MSUC) and meiotic prophase quality control in both sexes. Required for the DNA double-strand break-independent, BRCA1-dependent activation of ATR on the sex chromosomes that is essential for normal [...] (307 aa)
     
   
  0.508
LRRC71
Leucine-rich repeat-containing protein 71; Leucine rich repeat containing 71 (559 aa)
       
 
  0.477
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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