• Version:
  • 11.0 [archived version]
STRINGSTRING
TMEM91 TMEM91 C19orf47 C19orf47 TTC9B TTC9B ZNF780A ZNF780A C19orf54 C19orf54 ZNF546 ZNF546 GPRIN3 GPRIN3 TIGD2 TIGD2 JRKL JRKL MEGF9 MEGF9 CCDC53 CCDC53
"TIGD2" - Tigger transposable element-derived protein 2 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIGD2Tigger transposable element-derived protein 2; Helix-turn-helix CENPB type domain containing; DNA transposon derived genes (525 aa)    
Predicted Functional Partners:
MEGF9
Multiple epidermal growth factor-like domains protein 9; Multiple EGF like domains 9 (602 aa)
           
  0.583
ZNF780A
Zinc finger protein 780A; May be involved in transcriptional regulation; Zinc fingers C2H2-type (642 aa)
       
 
  0.574
CCDC53
WASH complex subunit 3; Acts at least in part as component of the WASH core complex whose assembly at the surface of endosomes seems to inhibit WASH nucleation-promoting factor (NPF) activity in recruiting and activating the Arp2/3 complex to induce actin polymerization, and which is involved in regulation of the fission of tubules that serve as transport intermediates during endosome sorting; Belongs to the CCDC53 family (194 aa)
           
  0.571
C19orf47
Uncharacterized protein C19orf47; Chromosome 19 open reading frame 47 (422 aa)
           
  0.559
GPRIN3
G protein-regulated inducer of neurite outgrowth 3; May be involved in neurite outgrowth (776 aa)
           
  0.556
C19orf54
UPF0692 protein C19orf54; Chromosome 19 open reading frame 54; Belongs to the UPF0692 family (351 aa)
           
  0.550
JRKL
Jerky protein homolog-like; Helix-turn-helix CENPB type domain containing; Belongs to the tigger transposable element derived protein family (524 aa)
       
   
0.534
ZNF546
Zinc finger protein 546; May be involved in transcriptional regulation; Zinc fingers C2H2-type (836 aa)
       
 
  0.533
TTC9B
Tetratricopeptide repeat domain containing (239 aa)
           
  0.519
TMEM91
Interferon induced transmembrane protein domain containing; Belongs to the CD225/Dispanin family (172 aa)
           
  0.518
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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