• Version:
  • 11.0 [archived version]
STRINGSTRING
SNX25 SNX25 POF1B POF1B LRRC9 LRRC9 BANF2 BANF2 C17orf89 C17orf89 SAMD12 SAMD12 BTG1 BTG1 AARD AARD ARL15 ARL15 UTP23 UTP23 FAM9C FAM9C
"SAMD12" - Sterile alpha motif domain containing 12 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD12Sterile alpha motif domain containing 12 (201 aa)    
Predicted Functional Partners:
LRRC9
Leucine-rich repeat-containing protein 9; Leucine rich repeat containing 9 (1453 aa)
           
  0.780
SNX25
Sorting nexin-25; May be involved in several stages of intracellular trafficking; Sorting nexins (840 aa)
           
  0.679
POF1B
Protein POF1B; Plays a key role in the organization of epithelial monolayers by regulating the actin cytoskeleton. May be involved in ovary development (589 aa)
           
  0.596
FAM9C
Protein FAM9C; Family with sequence similarity 9 member C (166 aa)
           
  0.539
BTG1
Protein BTG1; Anti-proliferative protein; BTG/Tob family (171 aa)
           
  0.538
BANF2
Barrier-to-autointegration factor-like protein; May play a role in BANF1 regulation and influence tissue-specific roles of BANF1; Belongs to the BAF family (97 aa)
           
  0.538
AARD
Alanine and arginine rich domain containing protein (155 aa)
           
  0.526
ARL15
ADP-ribosylation factor-like protein 15; ADP ribosylation factor like GTPase 15; ARF GTPase family (204 aa)
       
 
  0.524
C17orf89
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 8; Involved in the assembly of mitochondrial NADH-ubiquinone oxidoreductase complex (complex I, MT-ND1). Required to stabilize NDUFAF5 (74 aa)
           
  0.511
UTP23
rRNA-processing protein UTP23 homolog; Involved in rRNA-processing and ribosome biogenesis; Belongs to the UTP23/FCF1 family. UTP23 subfamily (249 aa)
           
  0.511
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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