• Version:
  • 11.0 [archived version]
STRINGSTRING
CIDEB CIDEB COPZ2 COPZ2 CDIP1 CDIP1 VGLL3 VGLL3 ZFP82 ZFP82 ATOH8 ATOH8 TCF12 TCF12 TBC1D2B TBC1D2B ZFP30 ZFP30 PPP3CB PPP3CB PPP3CC PPP3CC
"ATOH8" - Protein atonal homolog 8 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
ATOH8Protein atonal homolog 8; Transcription factor that binds a palindromic (canonical) core consensus DNA sequence 5’-CANNTG- 3’ known as an E-box element, possibly as a heterodimer with other bHLH proteins. Regulates endothelial cell proliferation, migration and tube-like structures formation. Modulates endothelial cell differentiation through NOS3. May be implicated in specification and differentiation of neuronal cell lineages in the brain (By similarity). May participate in kidney development and may be involved in podocyte differentiation (By similarity). During early embryonic devel [...] (321 aa)    
Predicted Functional Partners:
PPP3CB
Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform; Calcium-dependent, calmodulin-stimulated protein phosphatase. This subunit may have a role in the calmodulin activation of calcineurin (525 aa)
           
  0.498
ZFP30
Zinc finger protein 30 homolog; May be involved in transcriptional regulation; Zinc fingers C2H2-type (519 aa)
       
 
  0.491
PPP3CC
Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform; Calcium-dependent, calmodulin-stimulated protein phosphatase. This subunit may have a role in the calmodulin activation of calcineurin; Belongs to the PPP phosphatase family. PP-2B subfamily (521 aa)
           
  0.478
TBC1D2B
TBC1 domain family member 2B; May act as a GTPase-activating protein (963 aa)
     
   
  0.466
CDIP1
Cell death-inducing p53-target protein 1; Acts as an important p53/TP53-apoptotic effector. Regulates TNF-alpha-mediated apoptosis in a p53/TP53-dependent manner (208 aa)
           
  0.457
TCF12
Transcription factor 12; Transcriptional regulator. Involved in the initiation of neuronal differentiation. Activates transcription by binding to the E box (5’-CANNTG-3’); Basic helix-loop-helix proteins (706 aa)
       
 
  0.453
ZFP82
Zinc finger protein 82 homolog; May be involved in transcriptional regulation; Zinc fingers C2H2-type (532 aa)
       
 
  0.444
COPZ2
Coatomer subunit zeta-2; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properti [...] (210 aa)
     
   
  0.443
VGLL3
Transcription cofactor vestigial-like protein 3; May act as a specific coactivator for the mammalian TEFs; Vestigial like family (326 aa)
     
   
  0.441
CIDEB
Cell death activator CIDE-B; Activates apoptosis (219 aa)
     
   
  0.440
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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