• Version:
  • 11.0 [archived version]
STRINGSTRING
SS18 SS18 SSX1 SSX1 SSX2 SSX2 HEATR3 HEATR3 C14orf119 C14orf119 ENSG00000275464 ENSG00000275464 DDX47 DDX47 WDR12 WDR12 NOP58 NOP58 CIRH1A CIRH1A HGH1 HGH1
"HEATR3" - HEAT repeat-containing protein 3 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
HEATR3HEAT repeat-containing protein 3; Armadillo-like helical domain containing (680 aa)    
Predicted Functional Partners:
WDR12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; WD repeat domain containing (423 aa)
     
        0.839
CIRH1A
U3 small nucleolar RNA-associated protein 4 homolog; Ribosome biogenesis factor. Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in small subunit (SSU) pre-rRNA processing at sites A’, A0, 1 and 2b. Required for optimal pre-ribosomal RNA transcription by RNA polymerase. May be a transcriptional regulator. Acts as a positive regulator of HIVEP1 which specifically binds to the DNA sequence 5’-GGGACTTTCC-3’ found in enhancer elements of numerous viral promoters such as those of HIV-1, SV40, or CMV (686 aa)
     
        0.821
C14orf119
Uncharacterized protein C14orf119; Chromosome 14 open reading frame 119 (140 aa)
           
  0.745
NOP58
Nucleolar protein 58; Required for 60S ribosomal subunit biogenesis (By similarity). Core component of box C/D small nucleolar ribonucleoprotein (snoRNP) particles. Required for the biogenesis of box C/D snoRNAs such as U3, U8 and U14 snoRNAs; Belongs to the NOP5/NOP56 family (529 aa)
     
   
  0.733
SS18
Protein SSXT; Appears to function synergistically with RBM14 as a transcriptional coactivator. Isoform 1 and isoform 2 function in nuclear receptor coactivation. Isoform 1 and isoform 2 function in general transcriptional coactivation; BAF complex (418 aa)
           
  0.704
SSX2
Synovial sarcoma, X breakpoint 2; SSX family member 2 (223 aa)
           
  0.700
DDX47
Probable ATP-dependent RNA helicase DDX47; Involved in apoptosis. May have a role in rRNA processing and mRNA splicing. Associates with pre-rRNA precursors; Belongs to the DEAD box helicase family. DDX47/RRP3 subfamily (455 aa)
     
   
  0.691
SSX1
Protein SSX1; Could act as a modulator of transcription; Belongs to the SSX family (188 aa)
           
  0.669
HGH1
Protein HGH1 homolog; Armadillo-like helical domain containing; Belongs to the HGH1 family (390 aa)
     
   
  0.659
ENSG00000275464
annotation not available (919 aa)
     
        0.658
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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