• Version:
  • 11.0 [archived version]
STRINGSTRING
TMEM65 TMEM65 TTC9 TTC9 CSRNP3 CSRNP3 FOXO3 FOXO3 ZSWIM4 ZSWIM4 RASEF RASEF C10orf10 C10orf10 C6orf203 C6orf203 CCDC58 CCDC58 RPTN RPTN CRNN CRNN
"C10orf10" - Protein DEPP1 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
C10orf10Protein DEPP1; Acts as a critical modulator of FOXO3-induced autophagy via increased cellular ROS (212 aa)    
Predicted Functional Partners:
CRNN
Cornulin; Survival factor that participates in the clonogenicity of squamous esophageal epithelium cell lines, attenuates deoxycholic acid (DCA)-induced apoptotic cell death and release of calcium. When overexpressed in oral squamous carcinom cell lines, regulates negatively cell proliferation by the induction of G1 arrest; Belongs to the S100-fused protein family (495 aa)
           
  0.931
RPTN
Repetin; Involved in the cornified cell envelope formation. Multifunctional epidermal matrix protein. Reversibly binds calcium; EF-hand domain containing (784 aa)
           
  0.930
C6orf203
Uncharacterized protein C6orf203; Chromosome 6 open reading frame 203 (240 aa)
           
  0.591
ZSWIM4
Zinc finger SWIM-type containing 4 (989 aa)
           
  0.588
CSRNP3
Cysteine/serine-rich nuclear protein 3; Binds to the consensus sequence 5’-AGAGTG-3’ and has transcriptional activator activity. Plays a role in apoptosis (By similarity); Protein phosphatase 1 regulatory subunits (585 aa)
           
  0.587
TMEM65
Transmembrane protein 65; May play an important role in cardiac development and function. May regulate cardiac conduction and the function of the gap junction protein GJA1. May contributes to the stability and proper localization of GJA1 to cardiac intercalated disk thereby regulating gap junction communication (By similarity). May also play a role in the regulation of mitochondrial respiration and mitochondrial DNA copy number maintenance (240 aa)
           
  0.562
FOXO3
Forkhead box protein O3; Transcriptional activator which triggers apoptosis in the absence of survival factors, including neuronal cell death upon oxidative stress. Recognizes and binds to the DNA sequence 5’-[AG]TAAA[TC]A-3’. Participates in post-transcriptional regulation of MYC- following phosphorylation by MAPKAPK5, promotes induction of miR-34b and miR-34c expression, 2 post- transcriptional regulators of MYC that bind to the 3’UTR of MYC transcript and prevent its translation; Forkhead boxes (673 aa)
           
  0.562
TTC9
Tetratricopeptide repeat domain containing; Belongs to the TTC9 family (222 aa)
           
  0.559
RASEF
Ras and EF-hand domain-containing protein; Binds predominantly GDP, and also GTP; EF-hand domain containing (740 aa)
           
  0.532
CCDC58
Coiled-coil domain containing 58; Belongs to the CCDC58 family (144 aa)
           
  0.524
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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