• Version:
  • 11.0 [archived version]
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UBL7 UBL7 RWDD1 RWDD1 PAMR1 PAMR1 CRADD CRADD FAM188A FAM188A SUGCT SUGCT TMEM45A TMEM45A TMEM9 TMEM9 ARL6IP5 ARL6IP5 COPS7A COPS7A GKN2 GKN2
"FAM188A" - Ubiquitin carboxyl-terminal hydrolase MINDY-3 in Homo sapiens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
FAM188AUbiquitin carboxyl-terminal hydrolase MINDY-3; Hydrolase that can remove ’Lys-48’-linked conjugated ubiquitin from proteins (445 aa)    
Predicted Functional Partners:
TMEM45A
Transmembrane protein 45A; Belongs to the TMEM45 family (275 aa)
           
  0.738
CRADD
Death domain-containing protein CRADD; Apoptotic adaptor molecule specific for caspase-2 and FASL/TNF receptor-interacting protein RIP. In the presence of RIP and TRADD, CRADD recruits caspase-2 to the TNFR-1 signalling complex; Caspase recruitment domain containing (199 aa)
           
  0.718
ARL6IP5
PRA1 family protein 3; Regulates intracellular concentrations of taurine and glutamate. Negatively modulates SLC1A1/EAAC1 glutamate transport activity by decreasing its affinity for glutamate in a PKC activity-dependent manner. May be involved in membrane traffic; YIP family (188 aa)
     
   
  0.714
TMEM9
Transmembrane protein 9; May be involved in intracellular transport (186 aa)
           
  0.669
GKN2
Gastrokine-2; BRICHOS domain containing (184 aa)
           
  0.669
PAMR1
Inactive serine protease PAMR1; May play a role in regeneration of skeletal muscle; Belongs to the peptidase S1 family (737 aa)
           
  0.658
SUGCT
Succinate--hydroxymethylglutarate CoA-transferase; Catalyzes the succinyl-CoA-dependent conversion of glutarate to glutaryl-CoA. Can use different dicarboxylic acids as CoA acceptors, the preferred ones are glutarate, succinate, adipate, and 3-hydroxymethylglutarate; Belongs to the CaiB/BaiF CoA-transferase family (445 aa)
           
  0.609
UBL7
Ubiquitin-like protein 7; Ubiquitin like 7 (380 aa)
           
  0.604
RWDD1
RWD domain-containing protein 1; Protects DRG2 from proteolytic degradation; Belongs to the RWDD1/GIR2 family (243 aa)
           
  0.582
COPS7A
COP9 signalosome complex subunit 7a; Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF-type complexes such as SCF, CSA or DDB2. The complex is also involved in phosphorylation of p53/TP53, JUN, I-kappa-B-alpha/NFKBIA, ITPK1 and IRF8/ICSBP, possibly via its association with CK2 and PKD kinases. CSN-dep [...] (275 aa)
           
  0.579
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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