YIPF5 protein (human) - STRING database

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

YIPF5

Protein YIPF5; Plays a role in transport between endoplasmic reticulum and Golgi; Yip1 domain containing (257 aa)

Predicted Functional Partners:

YIF1A

0.983

YIPF2

0.946

YIPF3

0.834

YIPF6

0.831

YIF1B

0.795

PLAC8L1

0.781

REEP5

0.781

GRXCR2

0.761

YIPF1

0.749

RBM27

0.726

Your Current Organism:

Homo sapiens

NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but resolution at 400 dpi

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as simple tabular text output:

download

TSV: tab separated values - can be opened in Excel

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GRXCR2	PLAC8L1	ENSP00000367214	ENSP00000309087	Glutaredoxin domain-containing cysteine-rich protein 2; Could play a role in maintaining cochlear stereocilia bundles that are involved in sound detection; Deafness associated genes	PLAC8-like protein 1; PLAC8 like 1; Belongs to the cornifelin family	0.828
GRXCR2	RBM27	ENSP00000367214	ENSP00000265271	Glutaredoxin domain-containing cysteine-rich protein 2; Could play a role in maintaining cochlear stereocilia bundles that are involved in sound detection; Deafness associated genes	RNA-binding protein 27; RNA binding motif containing	0.714
GRXCR2	YIPF5	ENSP00000367214	ENSP00000274496	Glutaredoxin domain-containing cysteine-rich protein 2; Could play a role in maintaining cochlear stereocilia bundles that are involved in sound detection; Deafness associated genes	Protein YIPF5; Plays a role in transport between endoplasmic reticulum and Golgi; Yip1 domain containing	0.761
PLAC8L1	GRXCR2	ENSP00000309087	ENSP00000367214	PLAC8-like protein 1; PLAC8 like 1; Belongs to the cornifelin family	Glutaredoxin domain-containing cysteine-rich protein 2; Could play a role in maintaining cochlear stereocilia bundles that are involved in sound detection; Deafness associated genes	0.828
PLAC8L1	RBM27	ENSP00000309087	ENSP00000265271	PLAC8-like protein 1; PLAC8 like 1; Belongs to the cornifelin family	RNA-binding protein 27; RNA binding motif containing	0.677
PLAC8L1	YIPF5	ENSP00000309087	ENSP00000274496	PLAC8-like protein 1; PLAC8 like 1; Belongs to the cornifelin family	Protein YIPF5; Plays a role in transport between endoplasmic reticulum and Golgi; Yip1 domain containing	0.781
RBM27	GRXCR2	ENSP00000265271	ENSP00000367214	RNA-binding protein 27; RNA binding motif containing	Glutaredoxin domain-containing cysteine-rich protein 2; Could play a role in maintaining cochlear stereocilia bundles that are involved in sound detection; Deafness associated genes	0.714
RBM27	PLAC8L1	ENSP00000265271	ENSP00000309087	RNA-binding protein 27; RNA binding motif containing	PLAC8-like protein 1; PLAC8 like 1; Belongs to the cornifelin family	0.677
RBM27	YIPF5	ENSP00000265271	ENSP00000274496	RNA-binding protein 27; RNA binding motif containing	Protein YIPF5; Plays a role in transport between endoplasmic reticulum and Golgi; Yip1 domain containing	0.726
REEP5	YIF1A	ENSP00000368959	ENSP00000366098	Receptor expression-enhancing protein 5; May promote functional cell surface expression of olfactory receptors; Belongs to the DP1 family	Protein YIF1A; Possible role in transport between endoplasmic reticulum and Golgi; Belongs to the YIF1 family	0.514
REEP5	YIPF5	ENSP00000368959	ENSP00000274496	Receptor expression-enhancing protein 5; May promote functional cell surface expression of olfactory receptors; Belongs to the DP1 family	Protein YIPF5; Plays a role in transport between endoplasmic reticulum and Golgi; Yip1 domain containing	0.781
YIF1A	REEP5	ENSP00000366098	ENSP00000368959	Protein YIF1A; Possible role in transport between endoplasmic reticulum and Golgi; Belongs to the YIF1 family	Receptor expression-enhancing protein 5; May promote functional cell surface expression of olfactory receptors; Belongs to the DP1 family	0.514
YIF1A	YIPF1	ENSP00000366098	ENSP00000072644	Protein YIF1A; Possible role in transport between endoplasmic reticulum and Golgi; Belongs to the YIF1 family	Protein YIPF1; Yip1 domain family member 1; Belongs to the YIP1 family	0.484
YIF1A	YIPF2	ENSP00000366098	ENSP00000253031	Protein YIF1A; Possible role in transport between endoplasmic reticulum and Golgi; Belongs to the YIF1 family	Protein YIPF2; Yip1 domain family member 2	0.599
YIF1A	YIPF3	ENSP00000366098	ENSP00000361499	Protein YIF1A; Possible role in transport between endoplasmic reticulum and Golgi; Belongs to the YIF1 family	Protein YIPF3; Involved in the maintenance of the Golgi structure. May play a role in hematopoiesis; Yip1 domain containing	0.597
YIF1A	YIPF5	ENSP00000366098	ENSP00000274496	Protein YIF1A; Possible role in transport between endoplasmic reticulum and Golgi; Belongs to the YIF1 family	Protein YIPF5; Plays a role in transport between endoplasmic reticulum and Golgi; Yip1 domain containing	0.983
YIF1A	YIPF6	ENSP00000366098	ENSP00000417573	Protein YIF1A; Possible role in transport between endoplasmic reticulum and Golgi; Belongs to the YIF1 family	Protein YIPF6; May be required for stable YIPF1 and YIPF2 protein expression; Yip1 domain containing	0.849
YIF1B	YIPF5	ENSP00000343435	ENSP00000274496	Protein YIF1B; Yip1 interacting factor homolog B, membrane trafficking protein; Belongs to the YIF1 family	Protein YIPF5; Plays a role in transport between endoplasmic reticulum and Golgi; Yip1 domain containing	0.795
YIF1B	YIPF6	ENSP00000343435	ENSP00000417573	Protein YIF1B; Yip1 interacting factor homolog B, membrane trafficking protein; Belongs to the YIF1 family	Protein YIPF6; May be required for stable YIPF1 and YIPF2 protein expression; Yip1 domain containing	0.711
YIPF1	YIF1A	ENSP00000072644	ENSP00000366098	Protein YIPF1; Yip1 domain family member 1; Belongs to the YIP1 family	Protein YIF1A; Possible role in transport between endoplasmic reticulum and Golgi; Belongs to the YIF1 family	0.484

page 1 of 3

Network

Cooccurrence

Experiments

Coexpression

Textmining

Neighborhood

Databases

Fusion

© STRING Consortium 2020

Credits

Access

Info

About