• Version:
  • 11.0 [archived version]
STRINGSTRING
PLEKHA1 PLEKHA1 FREM1 FREM1 FREM2 FREM2 ARMS2 ARMS2 FRAS1 FRAS1 VWA2 VWA2 C2 C2 HMCN1 HMCN1 FREM3 FREM3 RAX2 RAX2 CTDSPL CTDSPL
"HMCN1" - Hemicentin-1 in Homo sapiens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
HMCN1Hemicentin-1; Promotes cleavage furrow maturation during cytokinesis in preimplantation embryos. May play a role in the architecture of adhesive and flexible epithelial cell junctions. May play a role during myocardial remodeling by imparting an effect on cardiac fibroblast migration; Fibulins (5635 aa)    
Predicted Functional Partners:
FRAS1
Fraser extracellular matrix complex subunit 1 (1976 aa)
     
   
  0.807
FREM2
FRAS1-related extracellular matrix protein 2; Extracellular matrix protein required for maintenance of the integrity of the skin epithelium and for maintenance of renal epithelia. May be required for epidermal adhesion (3169 aa)
     
   
  0.730
FREM1
FRAS1-related extracellular matrix protein 1; Extracellular matrix protein that plays a role in epidermal differentiation and is required for epidermal adhesion during embryonic development; Belongs to the FRAS1 family (2179 aa)
     
   
  0.722
FREM3
FRAS1-related extracellular matrix protein 3; Extracellular matrix protein which may play a role in cell adhesion (2139 aa)
     
   
  0.719
ARMS2
Age-related maculopathy susceptibility 2 (107 aa)
           
  0.719
VWA2
Von Willebrand factor A domain containing 2 (755 aa)
     
   
  0.589
C2
Complement C2; Component C2 which is part of the classical pathway of the complement system is cleaved by activated factor C1 into two fragments- C2b and C2a. C2a, a serine protease, then combines with complement factor C4b to generate the C3 or C5 convertase; Belongs to the peptidase S1 family (752 aa)
           
  0.545
PLEKHA1
Pleckstrin homology domain-containing family A member 1; Binds specifically to phosphatidylinositol 3,4- diphosphate (PtdIns3,4P2), but not to other phosphoinositides. May recruit other proteins to the plasma membrane; Pleckstrin homology domain containing (404 aa)
           
  0.542
RAX2
Retina and anterior neural fold homeobox protein 2; May be involved in modulating the expression of photoreceptor specific genes. Binds to the Ret-1 and Bat-1 element within the rhodopsin promoter; PRD class homeoboxes and pseudogenes (184 aa)
           
  0.527
CTDSPL
CTD small phosphatase-like protein; Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells (By similarity). Preferentially catalyzes the dephosphorylation of ’Ser-5’ within the tandem 7 residue repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation; CTD family phosphatases (276 aa)
     
 
  0.520
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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