• Version:
  • 11.0 [archived version]
STRINGSTRING
SCFD1 SCFD1 GPR137 GPR137 OR12D2 OR12D2 GPR137C GPR137C TTC16 TTC16 TPRA1 TPRA1 GPR108 GPR108 GPR157 GPR157 GPR137B GPR137B RNF40 RNF40 CAPNS1 CAPNS1
"GPR108" - G protein-coupled receptor 108 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPR108G protein-coupled receptor 108; 7TM orphan receptors (543 aa)    
Predicted Functional Partners:
GPR137
Integral membrane protein GPR137; G protein-coupled receptor 137; Belongs to the GPR137 family (475 aa)
           
  0.662
GPR137C
Integral membrane protein GPR137C; G protein-coupled receptor 137C (429 aa)
           
  0.661
CAPNS1
Calpain small subunit 1; Regulatory subunit of the calcium-regulated non- lysosomal thiol-protease which catalyzes limited proteolysis of substrates involved in cytoskeletal remodeling and signal transduction; EF-hand domain containing (268 aa)
     
   
  0.642
TTC16
Tetratricopeptide repeat domain containing (873 aa)
           
  0.596
GPR137B
Integral membrane protein GPR137B; G protein-coupled receptor 137B; Belongs to the GPR137 family (399 aa)
           
  0.594
GPR157
G-protein coupled receptor 157; Orphan receptor that promotes neuronal differentiation of radial glial progenitors (RGPs). The activity of this receptor is mediated by a G(q)-protein that activates a phosphatidylinositol-calcium second messenger; 7TM orphan receptors (335 aa)
           
  0.586
TPRA1
Transmembrane protein adipocyte associated 1; 7TM orphan receptors (373 aa)
           
  0.581
OR12D2
Olfactory receptor 12D2; Odorant receptor; Olfactory receptors, family 12 (307 aa)
           
  0.558
RNF40
E3 ubiquitin-protein ligase BRE1B; Component of the RNF20/40 E3 ubiquitin-protein ligase complex that mediates monoubiquitination of ’Lys-120’ of histone H2B (H2BK120ub1). H2BK120ub1 gives a specific tag for epigenetic transcriptional activation and is also prerequisite for histone H3 ’Lys-4’ and ’Lys-79’ methylation (H3K4me and H3K79me, respectively). It thereby plays a central role in histone code and gene regulation. The RNF20/40 complex forms a H2B ubiquitin ligase complex in cooperation with the E2 enzyme UBE2A or UBE2B; reports about the cooperation with UBE2E1/UBCH are contradic [...] (1001 aa)
           
  0.535
SCFD1
Sec1 family domain-containing protein 1; Plays a role in SNARE-pin assembly and Golgi-to-ER retrograde transport via its interaction with COG4. Involved in vesicular transport between the endoplasmic reticulum and the Golgi (By similarity) (642 aa)
     
   
  0.515
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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