• Version:
  • 11.0 [archived version]
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RPS3 RPS3 RPS25 RPS25 RPL9 RPL9 RPL30 RPL30 RPS20 RPS20 RPS28 RPS28 RPS11 RPS11 EEFSEC EEFSEC RPS6 RPS6 SECISBP2 SECISBP2 RPL7A RPL7A
"EEFSEC" - Selenocysteine-specific elongation factor in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEFSECSelenocysteine-specific elongation factor; Translation factor necessary for the incorporation of selenocysteine into proteins. It probably replaces EF-Tu for the insertion of selenocysteine directed by the UGA codon. SelB binds GTP and GDP (596 aa)    
Predicted Functional Partners:
SECISBP2
Selenocysteine insertion sequence-binding protein 2; Binds to the SECIS element in the 3’-UTR of some mRNAs encoding selenoproteins. Binding is stimulated by SELB (854 aa)
         
  0.997
RPS3
40S ribosomal protein S3; Involved in translation as a component of the 40S small ribosomal subunit. Has endonuclease activity and plays a role in repair of damaged DNA. Cleaves phosphodiester bonds of DNAs containing altered bases with broad specificity and cleaves supercoiled DNA more efficiently than relaxed DNA. Displays high binding affinity for 7,8-dihydro-8-oxoguanine (8-oxoG), a common DNA lesion caused by reactive oxygen species (ROS). Has also been shown to bind with similar affinity to intact and damaged DNA. Stimulates the N-glycosylase activity of the base excision protein [...] (259 aa)
     
  0.986
RPL30
Ribosomal protein L30; Belongs to the eukaryotic ribosomal protein eL30 family (115 aa)
     
 
  0.980
RPS6
40S ribosomal protein S6; May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA; S ribosomal proteins (249 aa)
   
    0.972
RPS20
Ribosomal protein S20 (142 aa)
     
  0.968
RPL7A
Ribosomal protein L7a (266 aa)
   
  0.967
RPS11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family (158 aa)
     
  0.966
RPS28
Ribosomal protein S28; Belongs to the eukaryotic ribosomal protein eS28 family (69 aa)
   
    0.966
RPS25
Ribosomal protein S25 (125 aa)
     
  0.965
RPL9
L ribosomal proteins (192 aa)
     
    0.964
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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