• Version:
  • 11.0 [archived version]
STRINGSTRING
MRPS9 MRPS9 MRPS2 MRPS2 MRPS11 MRPS11 MRPS23 MRPS23 DAP3 DAP3 MRPS22 MRPS22 PTCD3 PTCD3 MRPS35 MRPS35 MRPS31 MRPS31 MRPS5 MRPS5 MRPS18B MRPS18B
"PTCD3" - Pentatricopeptide repeat domain-containing protein 3, mitochondrial in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTCD3Pentatricopeptide repeat domain-containing protein 3, mitochondrial; Mitochondrial RNA-binding protein that has a role in mitochondrial translation (689 aa)    
Predicted Functional Partners:
MRPS22
Mitochondrial ribosomal protein S22; Belongs to the mitochondrion-specific ribosomal protein mS22 family (360 aa)
     
  0.999
MRPS31
Mitochondrial ribosomal protein S31 (395 aa)
     
  0.999
MRPS35
Mitochondrial ribosomal protein S35 (323 aa)
     
    0.999
MRPS18B
Mitochondrial ribosomal protein S18B; Belongs to the bacterial ribosomal protein bS18 family. Mitochondrion-specific ribosomal protein mS40 subfamily (258 aa)
     
  0.999
DAP3
28S ribosomal protein S29, mitochondrial; Involved in mediating interferon-gamma-induced cell death; Belongs to the mitochondrion-specific ribosomal protein mS29 family (398 aa)
     
  0.999
MRPS2
Mitochondrial ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family (296 aa)
     
  0.999
MRPS23
Mitochondrial ribosomal protein S23; Belongs to the mitochondrion-specific ribosomal protein mS23 family (190 aa)
     
    0.999
MRPS9
Mitochondrial ribosomal protein S9 (396 aa)
     
  0.999
MRPS5
Mitochondrial ribosomal protein S5 (430 aa)
     
  0.998
MRPS11
Mitochondrial ribosomal protein S11 (194 aa)
     
  0.998
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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