• Version:
  • 11.0 [archived version]
STRINGSTRING
PPP6R1 PPP6R1 MRPS27 MRPS27 FAM83G FAM83G DHX16 DHX16 LSM4 LSM4 PYROXD1 PYROXD1 LSM2 LSM2 JAKMIP3 JAKMIP3 OR2L13 OR2L13 CCDC58 CCDC58 UPRT UPRT
"PYROXD1" - Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 in Homo sapiens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PYROXD1Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1; Involved in cellular response to oxidative stress; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. PYROXD1 subfamily (500 aa)    
Predicted Functional Partners:
DHX16
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16; Probable ATP-binding RNA helicase involved in pre-mRNA splicing; Belongs to the DEAD box helicase family. DEAH subfamily. DDX16/PRP8 sub-subfamily (1041 aa)
     
      0.821
LSM2
U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3’-terminal U-tract of U6 snRNA. May be involved in pre-mRNA splicing; Belongs to the snRNP Sm proteins family (95 aa)
       
      0.806
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3’-terminal U-tract of U6 snRNA; Belongs to the snRNP Sm proteins family (139 aa)
       
      0.791
UPRT
Uracil phosphoribosyltransferase homolog; Belongs to the UPRTase family (309 aa)
     
 
  0.753
FAM83G
Protein FAM83G; May regulate the bone morphogenetic proteins (BMP) pathway (823 aa)
           
  0.723
MRPS27
28S ribosomal protein S27, mitochondrial; RNA-binding component of the mitochondrial small ribosomal subunit (mt-SSU) that plays a role in mitochondrial protein synthesis. Stimulates mitochondrial mRNA translation of subunit components of the mitochondrial electron transport chain. Binds to the mitochondrial 12S rRNA (12S mt-rRNA) and tRNA(Glu). Involved also in positive regulation of cell proliferation and tumor cell growth (428 aa)
     
   
  0.680
PPP6R1
Serine/threonine-protein phosphatase 6 regulatory subunit 1; Regulatory subunit of protein phosphatase 6 (PP6). May function as a scaffolding PP6 subunit. Involved in the PP6- mediated dephosphorylation of NFKBIE opposing its degradation in response to TNF-alpha (881 aa)
           
  0.627
OR2L13
Olfactory receptor 2L13; Odorant receptor; Olfactory receptors, family 2 (312 aa)
           
  0.580
CCDC58
Coiled-coil domain containing 58; Belongs to the CCDC58 family (144 aa)
           
  0.576
JAKMIP3
Janus kinase and microtubule interacting protein 3 (844 aa)
           
  0.570
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo sapiens, human, man
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